| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895161
Identifier: 190895161
GI number: 190895161
Start: 909337
End: 909972
Strand: Reverse
Name: 190895161
Synonym: RHECIAT_PC0000833
Alternate gene names: NA
Gene position: 909972-909337 (Counterclockwise)
Preceding gene: 190895162
Following gene: 190895160
Centisome position: 83.37
GC content: 51.1
Gene sequence:
>636_bases ATGGCGCTGAAACCTAAGAAATCTGTCGTCTACAGTGTCGTTACCACTCGAAGCGATCGCGGAAGTGGCTGGGAACTGGT CAATCGGGATCGACTACAAGCCGGCGGCGGGATTCGACCGACGGTCCCATGGCCCGACGGTCCTCTGGTTCTGCCACGAG GTCCGTGGAACATGCCAAAATATCTGGAGCCTCCTCATTTTGTGTTCAAGCATAGGCTCGGACACGGTCCGCACGATTTC GATATCAGAGATGGCTTTTTCTTGATCTCACCTCAAATGAAAGAGCTGTTCGACGAGCTTGCGCCTGGCGACTGCGAGTA TACACGCTGCATTACCAGTTATGGCAACGGTGATGCCGGTCCAGAACTCTGGCTTTGCAGTGTTGTAAAGGCTTTTCGTG ACGCGGTCGATCTCGAAATTTCATCAAACGTAACTGTCTCCGGCTATGGGCTCTATTTGTTCCCGAACTTTAGGAAAATA GACCTAGCGTTCAAGTCTGCTGTGATCGGTTCGGCTCACCTTTTTCGGCTCGCAGAAAAAGCAAGCAGCCTTTTCTGCGA CGATGAATTCAAAATTCGATGTAGGGCCAAGGAGATAACGGGGATTTCCTTCGAGAAAATCGGCGCTCTCAATTAA
Upstream 100 bases:
>100_bases CTCAGAGAATTCCTGTCAGGATAGAGCGCTCACTCTTTTACCCATCTCAGGTTTATAGTCTCCATTTCCAATAGGAAAAC AAAGCTTTAGGATAATTTCC
Downstream 100 bases:
>100_bases TTATTGGAAGATCAAATGGTCACAACGTTCGTTGGTCCAACCGCAAGTCATCATGTCTTCACGCAAAATGCTTTCAATCT CTTCGGCGATCTGTTCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 211; Mature: 210
Protein sequence:
>211_residues MALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPKYLEPPHFVFKHRLGHGPHDF DIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAGPELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKI DLAFKSAVIGSAHLFRLAEKASSLFCDDEFKIRCRAKEITGISFEKIGALN
Sequences:
>Translated_211_residues MALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPKYLEPPHFVFKHRLGHGPHDF DIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAGPELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKI DLAFKSAVIGSAHLFRLAEKASSLFCDDEFKIRCRAKEITGISFEKIGALN >Mature_210_residues ALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPKYLEPPHFVFKHRLGHGPHDFD IRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAGPELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKID LAFKSAVIGSAHLFRLAEKASSLFCDDEFKIRCRAKEITGISFEKIGALN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23597; Mature: 23466
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPK CCCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCC YLEPPHFVFKHRLGHGPHDFDIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAG CCCCCHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCCCC PELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKIDLAFKSAVIGSAHLFRLAEK HHHHHHHHHHHHHHHHCEEECCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHH ASSLFCDDEFKIRCRAKEITGISFEKIGALN HHHCCCCCCEEEEEEEEECCCCCHHHCCCCC >Mature Secondary Structure ALKPKKSVVYSVVTTRSDRGSGWELVNRDRLQAGGGIRPTVPWPDGPLVLPRGPWNMPK CCCCCHHEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCEEECCCCCCCCC YLEPPHFVFKHRLGHGPHDFDIRDGFFLISPQMKELFDELAPGDCEYTRCITSYGNGDAG CCCCCHHHHHHHCCCCCCCCCCCCCEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCCCC PELWLCSVVKAFRDAVDLEISSNVTVSGYGLYLFPNFRKIDLAFKSAVIGSAHLFRLAEK HHHHHHHHHHHHHHHHCEEECCCEEEEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHH ASSLFCDDEFKIRCRAKEITGISFEKIGALN HHHCCCCCCEEEEEEEEECCCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA