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The map label for this gene is yecS [H]

Identifier: 190895142

GI number: 190895142

Start: 873487

End: 874155

Strand: Reverse

Name: yecS [H]

Synonym: RHECIAT_PC0000812

Alternate gene names: 190895142

Gene position: 874155-873487 (Counterclockwise)

Preceding gene: 190895143

Following gene: 190895141

Centisome position: 80.09

GC content: 53.21

Gene sequence:

>669_bases
ATGGGATATGATTTCGATTTCTCCGTGGTATGGGACGCATGGCCCATCCTTCTGGATGGCACACTCAAGGCTCTCTATTA
CACAGCTGTCTCAAGTATTCTGGCGCTCGTTCTGGGCGTCCTTGTGATGCTTATGCGTAGGAGCAATGTCTCGCCCGTTC
GCATAACAGCGCGAGTGTTCATCGAGGTCATTCGCAATACTCCATTCCTCGTCCAACTGTTCTTCATCTTTTTTGGGCTG
CCCTCCATCGGCTTGAAATTTTCGGTTTCGTTCGCAGCAATCGCGGCGCTGACTGTCAATACGGCGGCCTATATAGCCGA
GGTTCTTCGCGGTGGGGTCGACGGCTTGCCGTACGGCCAGATCGAAGCCGGCAAAGCCCTGGGCTTGAACCGACGCCAGA
TCTTCTTCGACATTATTCTGAAGCCATCCGTTCGTGCGGTCTATCCCGGTCTCTCCGCTCAATTCGTCCTTCTGATGCTG
ACCTCGAGCGTTGTCGCTTCGATCTCTGCGCCCGAACTGACCTATTCGGCGCAAATCATTGAATCGCAGTCCTTCCGTAG
CTTCGAAGTCTATTTCGTCGTCACAGGAATCTACCTGGCATTGTCCATCTGCATCTCGTCGTTCCTTCGGCTCTTTGGCC
GGTTCTACTTCTCCTATCCGACTAAATGA

Upstream 100 bases:

>100_bases
GCATGGCGTTGCAGTCGAAGTGGACGCCGATTTCGAGATCGCAAACTGATGATGAGACAAGTTCGCAAGAAACGCCGAAT
CGAAGACGACGGACGCGATT

Downstream 100 bases:

>100_bases
GGTCAGACCATGGTCAGAGAAATTTCCGTAAATGACCTTTGGATGCTCATGGAAGGGCTGAAGTGGACGGTTCTTCTTTC
GGCTATTGCGTTTGCAGGCG

Product: putative amino acid ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MGYDFDFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVMLMRRSNVSPVRITARVFIEVIRNTPFLVQLFFIFFGL
PSIGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLML
TSSVVASISAPELTYSAQIIESQSFRSFEVYFVVTGIYLALSICISSFLRLFGRFYFSYPTK

Sequences:

>Translated_222_residues
MGYDFDFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVMLMRRSNVSPVRITARVFIEVIRNTPFLVQLFFIFFGL
PSIGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLML
TSSVVASISAPELTYSAQIIESQSFRSFEVYFVVTGIYLALSICISSFLRLFGRFYFSYPTK
>Mature_221_residues
GYDFDFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVMLMRRSNVSPVRITARVFIEVIRNTPFLVQLFFIFFGLP
SIGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPYGQIEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLT
SSVVASISAPELTYSAQIIESQSFRSFEVYFVVTGIYLALSICISSFLRLFGRFYFSYPTK

Specific function: Probably part of the binding-protein-dependent transport system yecCS for an amino acid; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788226, Length=205, Percent_Identity=35.1219512195122, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=35.2112676056338, Blast_Score=117, Evalue=9e-28,
Organism=Escherichia coli, GI1787087, Length=195, Percent_Identity=26.1538461538462, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=27.8301886792453, Blast_Score=80, Evalue=7e-17,
Organism=Escherichia coli, GI1788645, Length=201, Percent_Identity=25.3731343283582, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI48994930, Length=120, Percent_Identity=31.6666666666667, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082239, Length=147, Percent_Identity=34.6938775510204, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787086, Length=210, Percent_Identity=24.7619047619048, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1788646, Length=215, Percent_Identity=24.6511627906977, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24582; Mature: 24451

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYDFDFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVMLMRRSNVSPVRITARVF
CCCCCCEEEHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IEVIRNTPFLVQLFFIFFGLPSIGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPYGQ
HHHHHCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSSVVASISAPELTYSAQII
CCCCCCCCCCCHHEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ESQSFRSFEVYFVVTGIYLALSICISSFLRLFGRFYFSYPTK
HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
GYDFDFSVVWDAWPILLDGTLKALYYTAVSSILALVLGVLVMLMRRSNVSPVRITARVF
CCCCCEEEHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH
IEVIRNTPFLVQLFFIFFGLPSIGLKFSVSFAAIAALTVNTAAYIAEVLRGGVDGLPYGQ
HHHHHCCHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
IEAGKALGLNRRQIFFDIILKPSVRAVYPGLSAQFVLLMLTSSVVASISAPELTYSAQII
CCCCCCCCCCCHHEEEEEEECCCHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ESQSFRSFEVYFVVTGIYLALSICISSFLRLFGRFYFSYPTK
HCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]