Click here to switch to the map view.

The map label for this gene is 190895122

Identifier: 190895122

GI number: 190895122

Start: 850308

End: 851132

Strand: Reverse

Name: 190895122

Synonym: RHECIAT_PC0000792

Alternate gene names: NA

Gene position: 851132-850308 (Counterclockwise)

Preceding gene: 190895126

Following gene: 190895120

Centisome position: 77.98

GC content: 50.55

Gene sequence:

>825_bases
ATGAACTATATGATGGACGATCCGGCGTCGTTTGCCGCCAACTTGCGAACGCTGTGTGATCGCCAAGGCTCGGTGGCGGC
CGTGTGCCGCAAGATCAAGGTCAATCGCCAACAATTCAACAAATATCTTTCCGGTGCCCATCTGCCTGCAGCGGCTAATA
TGCGTATTATTGCAAATTATTTCGGCTTGAGTGTGCCGATCCTGTTTTCCGACCCCGAGGAGTTCCGAACGCTCGTTGAT
GGTAACTTCTTTCATGCTATGTCGGCGGTCAGGCAACTGCCGGAATTTGCGCGTTTCGTTTCCGCAATGCTTGTCGAAAA
TTCCGTTCCCGACAGCGATCTCGTCGGAGTCTACGACCGATACCAATTCTCCTCAATCTACAAGGGCTTCGTGTTGAAGT
CCGCATTCTGCATATACAGAGCAAACCAGTTCCTGCAGCATTATTACGTCGAGCGTTTCCCCAGTTTCGATGATCCCAAG
AAGATGGAATATGTCTTCAAGTATTATGGTTTCTGTTTTCCAGTGGCGGATCGGTTATTCACAGCCGATTTCGAGGGCAT
TCAGTCGAACGAGCTGACCTTCGGCGTCTATGCTCAGGTCAAGCGCAACTCCAAGAAGTTCATGTTCGGGATTTCGAGTG
GAATTGCGGCGACAGTGTTTCGTCAGCCTTACTCGACTAAGGTCGCCTTACATTACAGGGGACCCGGTTTATTGAAGAGG
GAGCAGCTGAAAGGGATCACCGTCATGGACAAAAACGATCCGGCGATCCCTCGAGAGGCACTTCAATATCTGGGCGATGG
CTCAGACATGATTCAGATGTCATGA

Upstream 100 bases:

>100_bases
GATCCCCTATCGGAGCAATTTCGCAACGGGTTGAAGATGTTCTCAAAGTGGCGTAGAATTAGCGTCAGAGTGCTTCAGGT
TCGAGCTTTGGGATAGGGTC

Downstream 100 bases:

>100_bases
TCGGCTAACCCTGGCGCCCTGTCGCAATCGTCGATCAGGGGTGAAGCTCGACGGCAAGCCACACGGAATCGGTATCACAG
TAGTAGCGGTGCCATGGGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Cro/CI Family Transcriptional Regulator; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNYMMDDPASFAANLRTLCDRQGSVAAVCRKIKVNRQQFNKYLSGAHLPAAANMRIIANYFGLSVPILFSDPEEFRTLVD
GNFFHAMSAVRQLPEFARFVSAMLVENSVPDSDLVGVYDRYQFSSIYKGFVLKSAFCIYRANQFLQHYYVERFPSFDDPK
KMEYVFKYYGFCFPVADRLFTADFEGIQSNELTFGVYAQVKRNSKKFMFGISSGIAATVFRQPYSTKVALHYRGPGLLKR
EQLKGITVMDKNDPAIPREALQYLGDGSDMIQMS

Sequences:

>Translated_274_residues
MNYMMDDPASFAANLRTLCDRQGSVAAVCRKIKVNRQQFNKYLSGAHLPAAANMRIIANYFGLSVPILFSDPEEFRTLVD
GNFFHAMSAVRQLPEFARFVSAMLVENSVPDSDLVGVYDRYQFSSIYKGFVLKSAFCIYRANQFLQHYYVERFPSFDDPK
KMEYVFKYYGFCFPVADRLFTADFEGIQSNELTFGVYAQVKRNSKKFMFGISSGIAATVFRQPYSTKVALHYRGPGLLKR
EQLKGITVMDKNDPAIPREALQYLGDGSDMIQMS
>Mature_274_residues
MNYMMDDPASFAANLRTLCDRQGSVAAVCRKIKVNRQQFNKYLSGAHLPAAANMRIIANYFGLSVPILFSDPEEFRTLVD
GNFFHAMSAVRQLPEFARFVSAMLVENSVPDSDLVGVYDRYQFSSIYKGFVLKSAFCIYRANQFLQHYYVERFPSFDDPK
KMEYVFKYYGFCFPVADRLFTADFEGIQSNELTFGVYAQVKRNSKKFMFGISSGIAATVFRQPYSTKVALHYRGPGLLKR
EQLKGITVMDKNDPAIPREALQYLGDGSDMIQMS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31245; Mature: 31245

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYMMDDPASFAANLRTLCDRQGSVAAVCRKIKVNRQQFNKYLSGAHLPAAANMRIIANY
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHEEEH
FGLSVPILFSDPEEFRTLVDGNFFHAMSAVRQLPEFARFVSAMLVENSVPDSDLVGVYDR
HCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YQFSSIYKGFVLKSAFCIYRANQFLQHYYVERFPSFDDPKKMEYVFKYYGFCFPVADRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TADFEGIQSNELTFGVYAQVKRNSKKFMFGISSGIAATVFRQPYSTKVALHYRGPGLLKR
HHCCCCCCCCCEEEEEHHEECCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCH
EQLKGITVMDKNDPAIPREALQYLGDGSDMIQMS
HHHCCCEEECCCCCCCHHHHHHHHCCCCCEEECC
>Mature Secondary Structure
MNYMMDDPASFAANLRTLCDRQGSVAAVCRKIKVNRQQFNKYLSGAHLPAAANMRIIANY
CCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHEEEH
FGLSVPILFSDPEEFRTLVDGNFFHAMSAVRQLPEFARFVSAMLVENSVPDSDLVGVYDR
HCCEEEEEECCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
YQFSSIYKGFVLKSAFCIYRANQFLQHYYVERFPSFDDPKKMEYVFKYYGFCFPVADRLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH
TADFEGIQSNELTFGVYAQVKRNSKKFMFGISSGIAATVFRQPYSTKVALHYRGPGLLKR
HHCCCCCCCCCEEEEEHHEECCCCCEEEEEECCCHHHHHHCCCCCCEEEEEECCCCCCCH
EQLKGITVMDKNDPAIPREALQYLGDGSDMIQMS
HHHCCCEEECCCCCCCHHHHHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA