| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is yeaP [C]
Identifier: 190895088
GI number: 190895088
Start: 812792
End: 813529
Strand: Reverse
Name: yeaP [C]
Synonym: RHECIAT_PC0000757
Alternate gene names: 190895088
Gene position: 813529-812792 (Counterclockwise)
Preceding gene: 190895091
Following gene: 190895086
Centisome position: 74.53
GC content: 57.72
Gene sequence:
>738_bases ATGCATTTGTCAGCCCTCGCTTCCCTGCCGGGCGGCGGCAGCATCGAAGCTCTTGTCGTTTTTTCGGCGGTCATGCCGCG GCTATTTTTCATAGGAGCACAAATTGATCTCGTCGGTTGGCTCAGTCGGTGCGGCGGTTACTCCAGAAATCTCCGTTTGC CGGGAACAACGACTGCCGTTCAGGCACGCGAAGACGTCGCGGCGCAAGTTCGAACCGCTGAGCAAAGCGGAGCCTCGACG AACGAGCTCGAGCAGATTGTCGGCCGTGCCGGTCCGCCGAGCTACAGTGAAGAAGAACTGGTCACCAACGAAAATGAGAT CAACCACCGGGAATCCCTGAAAGAGAAACTACGTGCGGGCATTGCTGATCCCGACGAGGAACTGAAGGTGAAGGCTGCAT TGGTCTACCCTTCGTCCTGGCCTGACGAACAAAAGCTGGAAGCTGCTCGGACAGCCCAAGCTAACGGCAATCTGGACAGT TGTTACGTTCTGACGGGATTGGCAAACCGCCGCCAATTCACCAGCGATCTCGAGACAAGCTTTCCCATGCCGAAGGGTCA AAAGCTGGCGCTGATGCTGCTGGATCTGGATGACTTCAAACCGGTCAACGACACCCTTGGGCACGGCGCCGGCGACACGG TGCTCAAGATGACGGCGGAACGGATCCAGGCCGTGCTTCGCCGACGACCTCTCGTTGTCTTCCTCGAGCAGCAGACGACA CCGTCCAACAAAACATGA
Upstream 100 bases:
>100_bases AAAAGCGGATGTGAGGATAGAGGAGGCCGCGACTGGCTCCAGTCAGTCACAACGCGACCGTTTCTGACCGCCTGCGATCG CGCATGCGGACTAACGCCGC
Downstream 100 bases:
>100_bases AGTTGGCGAAGTTCGCGAAGTTCGCCCTGAAGCTTGAGGGAAGTTTCTTGGAGTTCGAAGCCTGAAAAGGTGAAGGAGTT GGCAGCCCAAGCGTTCCGTC
Product: hypothetical protein
Products: NA
Alternate protein names: Kinase Protein; Sensory Box/GGDEF Family Protein; GGDEF/EAL Sensory Box Protein; Sensory Transduction Protein Kinase
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MHLSALASLPGGGSIEALVVFSAVMPRLFFIGAQIDLVGWLSRCGGYSRNLRLPGTTTAVQAREDVAAQVRTAEQSGAST NELEQIVGRAGPPSYSEEELVTNENEINHRESLKEKLRAGIADPDEELKVKAALVYPSSWPDEQKLEAARTAQANGNLDS CYVLTGLANRRQFTSDLETSFPMPKGQKLALMLLDLDDFKPVNDTLGHGAGDTVLKMTAERIQAVLRRRPLVVFLEQQTT PSNKT
Sequences:
>Translated_245_residues MHLSALASLPGGGSIEALVVFSAVMPRLFFIGAQIDLVGWLSRCGGYSRNLRLPGTTTAVQAREDVAAQVRTAEQSGAST NELEQIVGRAGPPSYSEEELVTNENEINHRESLKEKLRAGIADPDEELKVKAALVYPSSWPDEQKLEAARTAQANGNLDS CYVLTGLANRRQFTSDLETSFPMPKGQKLALMLLDLDDFKPVNDTLGHGAGDTVLKMTAERIQAVLRRRPLVVFLEQQTT PSNKT >Mature_245_residues MHLSALASLPGGGSIEALVVFSAVMPRLFFIGAQIDLVGWLSRCGGYSRNLRLPGTTTAVQAREDVAAQVRTAEQSGAST NELEQIVGRAGPPSYSEEELVTNENEINHRESLKEKLRAGIADPDEELKVKAALVYPSSWPDEQKLEAARTAQANGNLDS CYVLTGLANRRQFTSDLETSFPMPKGQKLALMLLDLDDFKPVNDTLGHGAGDTVLKMTAERIQAVLRRRPLVVFLEQQTT PSNKT
Specific function: Unknown
COG id: COG2199
COG function: function code T; FOG: GGDEF domain
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26678; Mature: 26678
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: PS50887 GGDEF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLSALASLPGGGSIEALVVFSAVMPRLFFIGAQIDLVGWLSRCGGYSRNLRLPGTTTAV CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCHHH QAREDVAAQVRTAEQSGASTNELEQIVGRAGPPSYSEEELVTNENEINHRESLKEKLRAG HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCC IADPDEELKVKAALVYPSSWPDEQKLEAARTAQANGNLDSCYVLTGLANRRQFTSDLETS CCCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHC FPMPKGQKLALMLLDLDDFKPVNDTLGHGAGDTVLKMTAERIQAVLRRRPLVVFLEQQTT CCCCCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC PSNKT CCCCC >Mature Secondary Structure MHLSALASLPGGGSIEALVVFSAVMPRLFFIGAQIDLVGWLSRCGGYSRNLRLPGTTTAV CCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEECCCCCHHH QAREDVAAQVRTAEQSGASTNELEQIVGRAGPPSYSEEELVTNENEINHRESLKEKLRAG HHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHCC IADPDEELKVKAALVYPSSWPDEQKLEAARTAQANGNLDSCYVLTGLANRRQFTSDLETS CCCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHC FPMPKGQKLALMLLDLDDFKPVNDTLGHGAGDTVLKMTAERIQAVLRRRPLVVFLEQQTT CCCCCCCEEEEEEEECCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC PSNKT CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA