| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190895073
Identifier: 190895073
GI number: 190895073
Start: 798654
End: 798881
Strand: Reverse
Name: 190895073
Synonym: RHECIAT_PC0000740
Alternate gene names: NA
Gene position: 798881-798654 (Counterclockwise)
Preceding gene: 190895074
Following gene: 190895070
Centisome position: 73.19
GC content: 58.33
Gene sequence:
>228_bases TTGGAGAATATCGTTCTCACCGCGTTTTCCGGCCGCATCCTGCCTCTGGACGAGGGGGCCGCCGTCCAGGCGGCCCAATG GCATGTGCCAAATCCGAAGCCGATTAATGACGCCTATATTGCGGCGACAGCCTTCACCCGTCGCATGACGCTGGTGACGC GCAATATCAAGGATTTCGAGGGCATGGGAGTTGCACTCGTAAATCCGTGGGATGTGCCGCATGGTTAG
Upstream 100 bases:
>100_bases CCGAGACCTTCATTTCCTCCGTCGTGTTGCATGAGCTGGAGATTGGCCTCCGGCTGGTAGAGCATAATGATGTCGCCGCC GGCAAGGTGCTGCGCACTGG
Downstream 100 bases:
>100_bases TCCGGGAGTTGATGGGTCGGATTGTTTCAGTCTCGATCCGCCCATCAACTCCCGGACTAACTATGTAGAAGAGCAGTTCC GCCCAGTGTGCTCAACATCA
Product: putative plasmid stabilization protein
Products: NA
Alternate protein names: PilT Protein-Like; Plasmid Stabilization Protein; Plasmid Stability Protein StbB; Plasmid Stability-Like Protein; PilT Protein Domain Protein; PilT Protein-Like Protein; PilT Protein Domain-Containing Protein; PIN Domain Protein; Plasmid Stability Protein; Xin-Antitoxin System Toxin Component PIN Family; Addiction Module PIN Domain Protein; PilT Protein; PilT Protein N-Terminal
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MENIVLTAFSGRILPLDEGAAVQAAQWHVPNPKPINDAYIAATAFTRRMTLVTRNIKDFEGMGVALVNPWDVPHG
Sequences:
>Translated_75_residues MENIVLTAFSGRILPLDEGAAVQAAQWHVPNPKPINDAYIAATAFTRRMTLVTRNIKDFEGMGVALVNPWDVPHG >Mature_75_residues MENIVLTAFSGRILPLDEGAAVQAAQWHVPNPKPINDAYIAATAFTRRMTLVTRNIKDFEGMGVALVNPWDVPHG
Specific function: Unknown
COG id: COG1487
COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8216; Mature: 8216
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENIVLTAFSGRILPLDEGAAVQAAQWHVPNPKPINDAYIAATAFTRRMTLVTRNIKDFE CCCEEEEECCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHEEEEEECCCCCCC GMGVALVNPWDVPHG CCCEEEECCCCCCCC >Mature Secondary Structure MENIVLTAFSGRILPLDEGAAVQAAQWHVPNPKPINDAYIAATAFTRRMTLVTRNIKDFE CCCEEEEECCCEEEECCCCCEEEEEEEECCCCCCCCCEEEEEEHHHHEEEEEECCCCCCC GMGVALVNPWDVPHG CCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA