| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894965
Identifier: 190894965
GI number: 190894965
Start: 683569
End: 683997
Strand: Reverse
Name: 190894965
Synonym: RHECIAT_PC0000631
Alternate gene names: NA
Gene position: 683997-683569 (Counterclockwise)
Preceding gene: 190894972
Following gene: 190894964
Centisome position: 62.66
GC content: 59.91
Gene sequence:
>429_bases ATGGCCCTGGTCCGGGTGCCGGACACTGGCACACCGGGAAAGATGAGGTCTGCGTCGTCGCACCCGCGCTATCGCAGTCG AGATCGGCGCCGGCCGCAGCGCAGCCCCGGGAGCTCTTGGACCGCGTCAGTGCGTCAGGAATTCCGGACGATGGAAAGTA TTCGGTTTTTCACGACCGGCGCCACCGCGCCATTCGCACAGCAGCGTCTCCGTCCGCATAGAATTATCGATCACGTCGCT CCCCCCTGGGCGCATGCCATCTTCATCGATGGGAAGCGCAGATTCCGGTTCATCCCGCACCCTCTTCATGGCGGAAAAGG TCAAGCGGTACCTCGTTCGAACGGTTTGAAACTGCGGACGCTCTGGTTTCGGAAGCGTAAATGCCGTTCCGAAAAAAGCA ATGAAACCAGTTCCTTGCGGAAAAGCTGA
Upstream 100 bases:
>100_bases AACGCCTCGAGATCTTGCTGCTTCCAACACGCAGACTTCGCCCTCAGCGCGAGTTTGCGCCGGATAGTACGCCACGAAAT CTACCTAAAGATCGGCCGTC
Downstream 100 bases:
>100_bases TACGAAAAAATCGCGATCTGGCTAGGTTCTTCGGATTCCGGATAAGGCGTATGTCCGGCTTTGGATCAGTCTCCGCCGGG CCGATGCGCGCGCCGTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 141
Protein sequence:
>142_residues MALVRVPDTGTPGKMRSASSHPRYRSRDRRRPQRSPGSSWTASVRQEFRTMESIRFFTTGATAPFAQQRLRPHRIIDHVA PPWAHAIFIDGKRRFRFIPHPLHGGKGQAVPRSNGLKLRTLWFRKRKCRSEKSNETSSLRKS
Sequences:
>Translated_142_residues MALVRVPDTGTPGKMRSASSHPRYRSRDRRRPQRSPGSSWTASVRQEFRTMESIRFFTTGATAPFAQQRLRPHRIIDHVA PPWAHAIFIDGKRRFRFIPHPLHGGKGQAVPRSNGLKLRTLWFRKRKCRSEKSNETSSLRKS >Mature_141_residues ALVRVPDTGTPGKMRSASSHPRYRSRDRRRPQRSPGSSWTASVRQEFRTMESIRFFTTGATAPFAQQRLRPHRIIDHVAP PWAHAIFIDGKRRFRFIPHPLHGGKGQAVPRSNGLKLRTLWFRKRKCRSEKSNETSSLRKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16429; Mature: 16298
Theoretical pI: Translated: 12.58; Mature: 12.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALVRVPDTGTPGKMRSASSHPRYRSRDRRRPQRSPGSSWTASVRQEFRTMESIRFFTTG CEEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECC ATAPFAQQRLRPHRIIDHVAPPWAHAIFIDGKRRFRFIPHPLHGGKGQAVPRSNGLKLRT CCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEHH LWFRKRKCRSEKSNETSSLRKS HHHHHHHHHCCCCCCHHHHCCC >Mature Secondary Structure ALVRVPDTGTPGKMRSASSHPRYRSRDRRRPQRSPGSSWTASVRQEFRTMESIRFFTTG EEEECCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHEEECC ATAPFAQQRLRPHRIIDHVAPPWAHAIFIDGKRRFRFIPHPLHGGKGQAVPRSNGLKLRT CCCHHHHHHCCHHHHHHHCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCCEEHH LWFRKRKCRSEKSNETSSLRKS HHHHHHHHHCCCCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA