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The map label for this gene is etfBc [H]

Identifier: 190894922

GI number: 190894922

Start: 639621

End: 640370

Strand: Reverse

Name: etfBc [H]

Synonym: RHECIAT_PC0000587

Alternate gene names: 190894922

Gene position: 640370-639621 (Counterclockwise)

Preceding gene: 190894923

Following gene: 190894921

Centisome position: 58.67

GC content: 63.73

Gene sequence:

>750_bases
ATGAAGATTCTCGTGCCCGTCAAACGGGTTGTCGACTACAACGTGAAGATCCGGGTGAAGCCGGATGGCACGGGTGTCGA
GCTTGCCAATGTGAAGATGTCGATGAACCCGTTCGACGAGATCTCGGTGGAAGAGGCGCTGCGGCTGAAGGAAGCCGGCA
AGGCCGAGGAAGTGGTGGTGGTGTCGATCGGTCCGGCCAAGGCCGAGGAGACGCTGCGCACGGCGCTCGCCATGGGTGCC
GACCGGGCGATCCTGGTCGAGACCGACGATCAAGTCGAGCCGCTCGCCGTCGCCAAGATCCTCAAGGCGGTCGCCGATGC
CGAACAGCCGGGGCTGATCATCGTCGGCAAGCAGGCGATCGACGACGATTCCAACCAGACCGGCCAGATGCTGGCGGCAC
TGCTCGGTTCGGCCCAAGCGACCTTCGCCTCGAAGATCGAGATCGGCGACGGACGCGCGACGGTCACCCGCGAGGTCGAC
GGCGGTCTGCAGACGATCGAGATCAAGCTGCCGGCGGTCGTCACCACCGATCTTCGTCTGAACGAGCCGCGTTATGCCTC
GCTGCCGAACATCATGAAGGCGAAGAAGAAGCCGCTCGACAAGAAGAGCCCTGCTGATTTCGGCGTCTCCACGACGCCGC
GGCTGAAGGTGTTGAAGACCGAGGAGCCGTCCGGCCGCAAGGCCGGCGTCAAGGTCAAGTCGGTCGCCGAACTGGTCGAC
AGGCTGAAGAACGAAGCCGGCGTGCTGTAA

Upstream 100 bases:

>100_bases
GCGCGATGAGCAGGTTTAAACCTTGCAGCGTCCTGTGCGTGTCCGAAAAGACGTCCGGCGCTGTAGGGATTAGCATTCGG
AAGAAAAAAGGGGATTGCAA

Downstream 100 bases:

>100_bases
TCGGGTTGGAACAGGAGCAATTATCATGACCATTCTTCTTCTGGCCGACCATGACGGCCATCACCTCTCCGACCAGACCG
CCAAGGCGCTGACGGCAGCA

Product: electron transport flavoprotein, subunit beta

Products: NA

Alternate protein names: Beta-ETF; Electron transfer flavoprotein small subunit; ETFSS [H]

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDQVEPLAVAKILKAVADAEQPGLIIVGKQAIDDDSNQTGQMLAALLGSAQATFASKIEIGDGRATVTREVD
GGLQTIEIKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLDKKSPADFGVSTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
RLKNEAGVL

Sequences:

>Translated_249_residues
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDQVEPLAVAKILKAVADAEQPGLIIVGKQAIDDDSNQTGQMLAALLGSAQATFASKIEIGDGRATVTREVD
GGLQTIEIKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLDKKSPADFGVSTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
RLKNEAGVL
>Mature_249_residues
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVVVSIGPAKAEETLRTALAMGA
DRAILVETDDQVEPLAVAKILKAVADAEQPGLIIVGKQAIDDDSNQTGQMLAALLGSAQATFASKIEIGDGRATVTREVD
GGLQTIEIKLPAVVTTDLRLNEPRYASLPNIMKAKKKPLDKKSPADFGVSTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
RLKNEAGVL

Specific function: The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=247, Percent_Identity=57.085020242915, Blast_Score=273, Evalue=1e-73,
Organism=Homo sapiens, GI62420877, Length=232, Percent_Identity=56.4655172413793, Blast_Score=251, Evalue=6e-67,
Organism=Caenorhabditis elegans, GI25141345, Length=253, Percent_Identity=54.5454545454545, Blast_Score=246, Evalue=8e-66,
Organism=Saccharomyces cerevisiae, GI6321646, Length=250, Percent_Identity=53.2, Blast_Score=247, Evalue=1e-66,
Organism=Drosophila melanogaster, GI24651147, Length=246, Percent_Identity=58.130081300813, Blast_Score=258, Evalue=2e-69,
Organism=Drosophila melanogaster, GI24651145, Length=246, Percent_Identity=58.130081300813, Blast_Score=258, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 26613; Mature: 26613

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVV
CEEEEECHHHHCCCEEEEEECCCCCEEEEEEEEECCCCHHCCHHHHHHHHHCCCCCEEEE
VSIGPAKAEETLRTALAMGADRAILVETDDQVEPLAVAKILKAVADAEQPGLIIVGKQAI
EEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALLGSAQATFASKIEIGDGRATVTREVDGGLQTIEIKLPAVVTTDLRL
CCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDKKSPADFGVSTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
RLKNEAGVL
HHHHHCCCC
>Mature Secondary Structure
MKILVPVKRVVDYNVKIRVKPDGTGVELANVKMSMNPFDEISVEEALRLKEAGKAEEVVV
CEEEEECHHHHCCCEEEEEECCCCCEEEEEEEEECCCCHHCCHHHHHHHHHCCCCCEEEE
VSIGPAKAEETLRTALAMGADRAILVETDDQVEPLAVAKILKAVADAEQPGLIIVGKQAI
EEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCEEEEECHHC
DDDSNQTGQMLAALLGSAQATFASKIEIGDGRATVTREVDGGLQTIEIKLPAVVTTDLRL
CCCCCHHHHHHHHHHCCCHHHHEEEEEECCCCEEEEEECCCCEEEEEEEECEEEEECEEE
NEPRYASLPNIMKAKKKPLDKKSPADFGVSTTPRLKVLKTEEPSGRKAGVKVKSVAELVD
CCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHH
RLKNEAGVL
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8599534; 12597275 [H]