| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894920
Identifier: 190894920
GI number: 190894920
Start: 637959
End: 638651
Strand: Reverse
Name: 190894920
Synonym: RHECIAT_PC0000585
Alternate gene names: NA
Gene position: 638651-637959 (Counterclockwise)
Preceding gene: 190894921
Following gene: 190894919
Centisome position: 58.51
GC content: 61.76
Gene sequence:
>693_bases GTGGCGCGCATGGCGGGACGTCCAATCAGGCCCGGTGCTGACCTTCTCCTCAACGATGAGGAAAAGCCGGCCTATATAAG ACTGCATGACATCGGCCGGGAAAGGCGTCCCCGGCCGCTGCAGGAGTTCCTCAACGATATCGGTGGGCTGATGCTGTCGG CCGACGCTCCCGCCGTTGCCAGTTTCGTTGCCGGCAAAGTCCTTCAGAGGCTGCTCAAGACCGGCAAGGTGCACCCGGAA GGAGGCCCTCTTCCCGGTGTGCCCGAGGGATTGAATGACGCCATCAGTCATTTGGTAAGATCCGGACGGAAATACGAGGC GATCGCCTGCCAGTTCAAGAGCCTCGCCGACAGACTGCTCTGGAGACGCGGCCGCACTGGCCCGTTTGCCAGCCTGAACT TCGGCAATACGCACTCCCACGCCGTTCTGGTCGGTCCTGGCGGCATGGAGGAGCGCGCCGATCTCCGGGTCGGCGTGATC TATATGGATCGCTATACCCGCTTCCCCGATCATATTCAGACGCAGCCACGCGCGTTCATTCTGCTTTCGCCGGGAGAAAT CTGCCTTGGTGATTCCCAGTGGTTTTCTGCCGCGACCGGAACGGTCTTCGCCAATGATGCCGGGCAATCCTTCGCGATAA GATGCACGGCGCAGCCGCTTCTCGCGGTGTGGTGCCAGGTCGAGCCGGGATGA
Upstream 100 bases:
>100_bases AGGAGGCGCCGATCTTCCAGGTCGCCGACTACGGCCTCGTCGCCGATCTGTTCGACGCCCTGCCGGAATTGCAGAAGGCG CTTTAACGGGGAGACCGAAC
Downstream 100 bases:
>100_bases CACCAAGATGAGGCCGAAGCAGATGGTTTCGATCGCTCGGTCGCATCCCGCATAATTAACAACGGAAATTGAATTAACAG GAGGGATTATCAAATGGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MARMAGRPIRPGADLLLNDEEKPAYIRLHDIGRERRPRPLQEFLNDIGGLMLSADAPAVASFVAGKVLQRLLKTGKVHPE GGPLPGVPEGLNDAISHLVRSGRKYEAIACQFKSLADRLLWRRGRTGPFASLNFGNTHSHAVLVGPGGMEERADLRVGVI YMDRYTRFPDHIQTQPRAFILLSPGEICLGDSQWFSAATGTVFANDAGQSFAIRCTAQPLLAVWCQVEPG
Sequences:
>Translated_230_residues MARMAGRPIRPGADLLLNDEEKPAYIRLHDIGRERRPRPLQEFLNDIGGLMLSADAPAVASFVAGKVLQRLLKTGKVHPE GGPLPGVPEGLNDAISHLVRSGRKYEAIACQFKSLADRLLWRRGRTGPFASLNFGNTHSHAVLVGPGGMEERADLRVGVI YMDRYTRFPDHIQTQPRAFILLSPGEICLGDSQWFSAATGTVFANDAGQSFAIRCTAQPLLAVWCQVEPG >Mature_229_residues ARMAGRPIRPGADLLLNDEEKPAYIRLHDIGRERRPRPLQEFLNDIGGLMLSADAPAVASFVAGKVLQRLLKTGKVHPEG GPLPGVPEGLNDAISHLVRSGRKYEAIACQFKSLADRLLWRRGRTGPFASLNFGNTHSHAVLVGPGGMEERADLRVGVIY MDRYTRFPDHIQTQPRAFILLSPGEICLGDSQWFSAATGTVFANDAGQSFAIRCTAQPLLAVWCQVEPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25136; Mature: 25005
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: PS00070 ALDEHYDE_DEHYDR_CYS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMAGRPIRPGADLLLNDEEKPAYIRLHDIGRERRPRPLQEFLNDIGGLMLSADAPAVA CCCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCEEEECCCHHHH SFVAGKVLQRLLKTGKVHPEGGPLPGVPEGLNDAISHLVRSGRKYEAIACQFKSLADRLL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH WRRGRTGPFASLNFGNTHSHAVLVGPGGMEERADLRVGVIYMDRYTRFPDHIQTQPRAFI HHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCEEE LLSPGEICLGDSQWFSAATGTVFANDAGQSFAIRCTAQPLLAVWCQVEPG EECCCCEEECCCHHHHHCCCEEEECCCCCEEEEEEECCCEEEEEEEECCC >Mature Secondary Structure ARMAGRPIRPGADLLLNDEEKPAYIRLHDIGRERRPRPLQEFLNDIGGLMLSADAPAVA CCCCCCCCCCCCCEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCEEEECCCHHHH SFVAGKVLQRLLKTGKVHPEGGPLPGVPEGLNDAISHLVRSGRKYEAIACQFKSLADRLL HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH WRRGRTGPFASLNFGNTHSHAVLVGPGGMEERADLRVGVIYMDRYTRFPDHIQTQPRAFI HHCCCCCCEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEECCCCCCCHHHCCCCCEEE LLSPGEICLGDSQWFSAATGTVFANDAGQSFAIRCTAQPLLAVWCQVEPG EECCCCEEECCCHHHHHCCCEEEECCCCCEEEEEEECCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA