Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

Click here to switch to the map view.

The map label for this gene is 190894899

Identifier: 190894899

GI number: 190894899

Start: 617290

End: 617496

Strand: Reverse

Name: 190894899

Synonym: RHECIAT_PC0000564

Alternate gene names: NA

Gene position: 617496-617290 (Counterclockwise)

Preceding gene: 190894902

Following gene: 190894898

Centisome position: 56.57

GC content: 57.97

Gene sequence:

>207_bases
ATGCATGAGAGAAAAGCTGATGGCGATCAAAAACCGGATCTGCTCGCTCACTATCGGCCGGTGGCGATAAGAGCGGTCGC
AGCCGCATTCACCCTCAAGCGCGACAAGCCCCCTGCGCGTCCGCTTCACGAGACGGAATATTCCGGCCCGATTTTTACGG
ACGATGCCACCTGGGACGACGAGCCCGGTGTTCCATTTATCCGTTAG

Upstream 100 bases:

>100_bases
GTGACTGTGGTAGATTAATCGTCGGCAATGGGAGGAAGGGCGCAGCCGCCTGGCGCATTGCCGGGCTCGGTCGCTGCGAC
GTGTAAAAGGGGGATCGTAG

Downstream 100 bases:

>100_bases
ACGAAACATTCACCGATCAGGAACTCTCATGTTGAACGCAGCGATCGACCCCGCATCCTCCAAAGAACCCGCCGGCGGCG
TGCCGTTCGCCGCCTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MHERKADGDQKPDLLAHYRPVAIRAVAAAFTLKRDKPPARPLHETEYSGPIFTDDATWDDEPGVPFIR

Sequences:

>Translated_68_residues
MHERKADGDQKPDLLAHYRPVAIRAVAAAFTLKRDKPPARPLHETEYSGPIFTDDATWDDEPGVPFIR
>Mature_68_residues
MHERKADGDQKPDLLAHYRPVAIRAVAAAFTLKRDKPPARPLHETEYSGPIFTDDATWDDEPGVPFIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7699; Mature: 7699

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHERKADGDQKPDLLAHYRPVAIRAVAAAFTLKRDKPPARPLHETEYSGPIFTDDATWDD
CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCC
EPGVPFIR
CCCCCCCC
>Mature Secondary Structure
MHERKADGDQKPDLLAHYRPVAIRAVAAAFTLKRDKPPARPLHETEYSGPIFTDDATWDD
CCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCC
EPGVPFIR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA