| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894881
Identifier: 190894881
GI number: 190894881
Start: 592557
End: 593225
Strand: Reverse
Name: 190894881
Synonym: RHECIAT_PC0000546
Alternate gene names: NA
Gene position: 593225-592557 (Counterclockwise)
Preceding gene: 190894882
Following gene: 190894880
Centisome position: 54.35
GC content: 58.74
Gene sequence:
>669_bases ATGACCACGTTCCGTCCGAAATACATCACCTTCGATTGCTACGGCACGCTGACCAACTTCCAGATGGCGGAAGCAGCGCG CGACCTTTACGGCGAGCAGCTCGACGAGCCGCGTATGGTCGAGTTCATCAAGAATTTCGCCGCCTATCGTCTCGACGAGA TCATGGGCGCCTGGAAACCCTATGCCGAGGTGGTGCACAATTCGCTCGAGCGGGCATGCAAGCGCAACGGCGTGACCTTT CGCGACGAAGCCGCGCAAATGGTTTACGAGCGTGTTCCGACCTGGGGTCCGCATCGAGACGTACCCGAGGGCCTTGCCAA GGTCGCGCGGGAAATTCCGCTGGTCATCCTGTCCAACGCCATGGACGCTCAGATCATGTCGAATGTCGAAAAGCTCGGCG CGCCCTTCCACGCGGTTTATACCGCTCAACAGGCAAATGCCTATAAGCCGCGTTTCCAAGCCTTCGAATATATGTTCGAC ATGCTCGGCTGCGGGCCGCAGGACGTGCTGCATTGCTCGTCCTCCTTCCGCTACGATCTGATGTCGGCGCATGATCTCGG CATCAAGAACAAGGTCTGGGTCAATCGCGGCCACGAGCCGGCCAATCCCTATTACGGGTATGTCGAAATCCCGCATATTT CAGGCCTGCCGGGCGTCGTCGGACTCTGA
Upstream 100 bases:
>100_bases GATTCTGCTTCCGATGCCGCCGATTCAGGCAAGCCATGGGCAAGGCGGTGCCTATGATTGTGGACACGTCCCCCTGTTCC AATCTTTCGAGGATATGCTG
Downstream 100 bases:
>100_bases CGGAGACAAGCGGATGCAGTTCCAATCCTACTGGCACGACACGGCCCGCCCTTTTGCTGAGGCGGCCCAAGGTCCTGTCG AAGGACATTACGACGTCGCC
Product: putative 2-haloacid dehalogenase
Products: (R)-2-hydroxyacid; halide
Alternate protein names: HAD Family Hydrolase; Hydrolase; Haloalkanoic Acid Dehalogenase; Haloacid Dehalogenase; Dehalogenase; 2-Haloacid Dehalogenase; Haloacid Dehalogenase-Like Hydrolase; Haloacid Dehalogenase I; 2-Haloalkanoic Acid Dehalogenase; Haloacid Dehydrogenase; 2-Haloacid Halidohydrolase Type II; HAD-Superfamily Hydrolase; Haloacid Dehalogenase Type II Truncated; 2-Haloacid Halidohydrolase IVa; 2-Haloacid Halidohydrolase IVA; Dehalogenase Protein; HAD Superfamily Haloalkanoic Acid Dehalogenase
Number of amino acids: Translated: 222; Mature: 221
Protein sequence:
>222_residues MTTFRPKYITFDCYGTLTNFQMAEAARDLYGEQLDEPRMVEFIKNFAAYRLDEIMGAWKPYAEVVHNSLERACKRNGVTF RDEAAQMVYERVPTWGPHRDVPEGLAKVAREIPLVILSNAMDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFD MLGCGPQDVLHCSSSFRYDLMSAHDLGIKNKVWVNRGHEPANPYYGYVEIPHISGLPGVVGL
Sequences:
>Translated_222_residues MTTFRPKYITFDCYGTLTNFQMAEAARDLYGEQLDEPRMVEFIKNFAAYRLDEIMGAWKPYAEVVHNSLERACKRNGVTF RDEAAQMVYERVPTWGPHRDVPEGLAKVAREIPLVILSNAMDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFD MLGCGPQDVLHCSSSFRYDLMSAHDLGIKNKVWVNRGHEPANPYYGYVEIPHISGLPGVVGL >Mature_221_residues TTFRPKYITFDCYGTLTNFQMAEAARDLYGEQLDEPRMVEFIKNFAAYRLDEIMGAWKPYAEVVHNSLERACKRNGVTFR DEAAQMVYERVPTWGPHRDVPEGLAKVAREIPLVILSNAMDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFDM LGCGPQDVLHCSSSFRYDLMSAHDLGIKNKVWVNRGHEPANPYYGYVEIPHISGLPGVVGL
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.8.1.2
Molecular weight: Translated: 25240; Mature: 25109
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTFRPKYITFDCYGTLTNFQMAEAARDLYGEQLDEPRMVEFIKNFAAYRLDEIMGAWKP CCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH YAEVVHNSLERACKRNGVTFRDEAAQMVYERVPTWGPHRDVPEGLAKVAREIPLVILSNA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHCCCC MDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFDMLGCGPQDVLHCSSSFRYDL HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHH MSAHDLGIKNKVWVNRGHEPANPYYGYVEIPHISGLPGVVGL HHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCC >Mature Secondary Structure TTFRPKYITFDCYGTLTNFQMAEAARDLYGEQLDEPRMVEFIKNFAAYRLDEIMGAWKP CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCH YAEVVHNSLERACKRNGVTFRDEAAQMVYERVPTWGPHRDVPEGLAKVAREIPLVILSNA HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHCCCC MDAQIMSNVEKLGAPFHAVYTAQQANAYKPRFQAFEYMFDMLGCGPQDVLHCSSSFRYDL HHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHH MSAHDLGIKNKVWVNRGHEPANPYYGYVEIPHISGLPGVVGL HHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (S)-2-haloacid; H2O
Specific reaction: (S)-2-haloacid + H2O = (R)-2-hydroxyacid + halide
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA