| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894777
Identifier: 190894777
GI number: 190894777
Start: 472727
End: 473863
Strand: Reverse
Name: 190894777
Synonym: RHECIAT_PC0000442
Alternate gene names: NA
Gene position: 473863-472727 (Counterclockwise)
Preceding gene: 190894778
Following gene: 190894776
Centisome position: 43.41
GC content: 64.73
Gene sequence:
>1137_bases ATGAATGCTTCCCCCAAACCTTCGAAGGTCGTCGTCATCGGCGGCGGCATATTCGGGGTCTCGACATCGGTTCACCTCGC TCGGCTCGGGATCGCCACCGTTCTCGTCAATGACGGTCCGCTTGCCAATGGCGCTTCCGGCCGATCGCTCGCCTGGCTGA ACTCTGCGCGGAAACGTTCCGCCGCCTATCACCGGCTGCGTCTCGCCGGCATTGACCGCTACCGCACACTGGCTGCCCGC TATCCGGATGCGCCGTGGCTGCGCTTCGACGGCGGCCTGACCTGGGATGCTGACGATGACGGCAACGAGATTTCCGAAAT CTACGATTATGAGCGTGATCTCGGCTATCACGCGCAATGGATTGTTCCGGAGGAGATTGCCGGGGCGACGCCAGGCGTCG ATGCGCGCGCCGTCACGCCGCAGGGCGCGATCTTCAATCCCGGGGAAGGCTGGGTCGATCTTCCCGCTTTGATCGACACG CTCGCGCAGGAATTCCGCTCGCTCGGCGGCGAGATCGTCACCGATGCCGGACGGGCGACGGTTGATATCGAAGGGGCGCG CGTGCGCGGGGTGACGTCAGCGAACGGCAGGCATTGGGACGCCGAGTCCGTGCTGCTTGCTGCCGGCGCCGCCGTTCCTG CAATCGTGGCCGACGCCGGCCAGCAGATCGGGGATGCGACCCCTGTCGCCCTGCTCGTCAGAACCAAGCCGATCAGCCAT CCGTTGAAGGCCGTGCTCAACACCCCGCGGGTTGCCATCCGGCCAACGCCCAATGGCGGCTTTGCGCTCGATTCCGCCTG GTCGGAGGAAGAGGTGAGGGTCAACCCGGACGGCAGCTATGATGTCAGGCAATCGACGCTGGACGGTTTGCTGCACGAAG CTTCCATGGTTCTCGAAGGCAATCCGGCGCTGGAGATCGAGGATTACGGCGTCGGCCCAAAGCCGATCCCGGGCGACGGC GAGCCGGTCTTTGGCGAATTGCCGTCGATCTGGGGTTATTTCGTCGCCTTCAGCCATAGCGGCGCGACCCTCGGCCTTAT TGCCGGTGAATTGCTCGCCCTCGAGATTGCTACCGGGTGCCGCCATCCGCTGCTGGCGGATTTTCGGCCCGAACGTTTCA CCCCCCCGGGACGATGA
Upstream 100 bases:
>100_bases ATCCCAGAAGCGAGCGGCTGCAACGCTTCCTCGCGGAAGTCCTCTGACGCGCCCGCGTCAATGCGTTCGAATGAGAGAAG AGCAGGATAAGGTTATCGAC
Downstream 100 bases:
>100_bases AAACCTGGCAGGAGCGCGGCGGCCAGATCGGCGGGTGGGATCAATTTGCGCCATTGGGCGTTCTGCCGTGAGGAAACACG GGAGACGCATCATGTTCAAG
Product: putative D-amino acid oxidase
Products: NA
Alternate protein names: Fructosyl-Amino Acid Oxidase; D-Amino Acid Oxidase Protein; Oxidoreductase; Glycine/D-Amino Acid Oxidase Deaminating; D-Amino Acid Oxidase; Fructosyl Amino Acid Oxidase
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MNASPKPSKVVVIGGGIFGVSTSVHLARLGIATVLVNDGPLANGASGRSLAWLNSARKRSAAYHRLRLAGIDRYRTLAAR YPDAPWLRFDGGLTWDADDDGNEISEIYDYERDLGYHAQWIVPEEIAGATPGVDARAVTPQGAIFNPGEGWVDLPALIDT LAQEFRSLGGEIVTDAGRATVDIEGARVRGVTSANGRHWDAESVLLAAGAAVPAIVADAGQQIGDATPVALLVRTKPISH PLKAVLNTPRVAIRPTPNGGFALDSAWSEEEVRVNPDGSYDVRQSTLDGLLHEASMVLEGNPALEIEDYGVGPKPIPGDG EPVFGELPSIWGYFVAFSHSGATLGLIAGELLALEIATGCRHPLLADFRPERFTPPGR
Sequences:
>Translated_378_residues MNASPKPSKVVVIGGGIFGVSTSVHLARLGIATVLVNDGPLANGASGRSLAWLNSARKRSAAYHRLRLAGIDRYRTLAAR YPDAPWLRFDGGLTWDADDDGNEISEIYDYERDLGYHAQWIVPEEIAGATPGVDARAVTPQGAIFNPGEGWVDLPALIDT LAQEFRSLGGEIVTDAGRATVDIEGARVRGVTSANGRHWDAESVLLAAGAAVPAIVADAGQQIGDATPVALLVRTKPISH PLKAVLNTPRVAIRPTPNGGFALDSAWSEEEVRVNPDGSYDVRQSTLDGLLHEASMVLEGNPALEIEDYGVGPKPIPGDG EPVFGELPSIWGYFVAFSHSGATLGLIAGELLALEIATGCRHPLLADFRPERFTPPGR >Mature_378_residues MNASPKPSKVVVIGGGIFGVSTSVHLARLGIATVLVNDGPLANGASGRSLAWLNSARKRSAAYHRLRLAGIDRYRTLAAR YPDAPWLRFDGGLTWDADDDGNEISEIYDYERDLGYHAQWIVPEEIAGATPGVDARAVTPQGAIFNPGEGWVDLPALIDT LAQEFRSLGGEIVTDAGRATVDIEGARVRGVTSANGRHWDAESVLLAAGAAVPAIVADAGQQIGDATPVALLVRTKPISH PLKAVLNTPRVAIRPTPNGGFALDSAWSEEEVRVNPDGSYDVRQSTLDGLLHEASMVLEGNPALEIEDYGVGPKPIPGDG EPVFGELPSIWGYFVAFSHSGATLGLIAGELLALEIATGCRHPLLADFRPERFTPPGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI20130091, Length=392, Percent_Identity=23.7244897959184, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40040; Mature: 40040
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNASPKPSKVVVIGGGIFGVSTSVHLARLGIATVLVNDGPLANGASGRSLAWLNSARKRS CCCCCCCCEEEEECCCEEECCCHHHHHHHCEEEEEECCCCCCCCCCCCEEHHHHHHHHHH AAYHRLRLAGIDRYRTLAARYPDAPWLRFDGGLTWDADDDGNEISEIYDYERDLGYHAQW HHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCEEE IVPEEIAGATPGVDARAVTPQGAIFNPGEGWVDLPALIDTLAQEFRSLGGEIVTDAGRAT ECHHHHCCCCCCCCCEEECCCCCEECCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCEE VDIEGARVRGVTSANGRHWDAESVLLAAGAAVPAIVADAGQQIGDATPVALLVRTKPISH EEECCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCH PLKAVLNTPRVAIRPTPNGGFALDSAWSEEEVRVNPDGSYDVRQSTLDGLLHEASMVLEG HHHHHHCCCCEEEEECCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHEEEECC NPALEIEDYGVGPKPIPGDGEPVFGELPSIWGYFVAFSHSGATLGLIAGELLALEIATGC CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEHHHHHHHEEEHHHCC RHPLLADFRPERFTPPGR CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNASPKPSKVVVIGGGIFGVSTSVHLARLGIATVLVNDGPLANGASGRSLAWLNSARKRS CCCCCCCCEEEEECCCEEECCCHHHHHHHCEEEEEECCCCCCCCCCCCEEHHHHHHHHHH AAYHRLRLAGIDRYRTLAARYPDAPWLRFDGGLTWDADDDGNEISEIYDYERDLGYHAQW HHHHHHHHHCCHHHHHHHHCCCCCCEEEECCCEEECCCCCCCHHHHHHHHHHCCCCCEEE IVPEEIAGATPGVDARAVTPQGAIFNPGEGWVDLPALIDTLAQEFRSLGGEIVTDAGRAT ECHHHHCCCCCCCCCEEECCCCCEECCCCCCEEHHHHHHHHHHHHHHCCCEEEECCCCEE VDIEGARVRGVTSANGRHWDAESVLLAAGAAVPAIVADAGQQIGDATPVALLVRTKPISH EEECCCEEEEEECCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCH PLKAVLNTPRVAIRPTPNGGFALDSAWSEEEVRVNPDGSYDVRQSTLDGLLHEASMVLEG HHHHHHCCCCEEEEECCCCCEEECCCCCCCCEEECCCCCCHHHHHHHHHHHHHHEEEECC NPALEIEDYGVGPKPIPGDGEPVFGELPSIWGYFVAFSHSGATLGLIAGELLALEIATGC CCCEEEECCCCCCCCCCCCCCCCCCCCHHHHEEEEEEECCCCEEEHHHHHHHEEEHHHCC RHPLLADFRPERFTPPGR CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA