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The map label for this gene is ydaO [H]

Identifier: 190894644

GI number: 190894644

Start: 328190

End: 330085

Strand: Reverse

Name: ydaO [H]

Synonym: RHECIAT_PC0000307

Alternate gene names: 190894644

Gene position: 330085-328190 (Counterclockwise)

Preceding gene: 190894651

Following gene: 190894643

Centisome position: 30.24

GC content: 61.02

Gene sequence:

>1896_bases
TTGAACCTCAGCACGCTCCTGTTCGGTCGGCGTCTTGCCAATCGCGAGCATGAAGACAAGAAGATCGGTTGGATCGCAGC
CGTGCCGGCAATGGGCCTGGATGGCCTGGGATCGTCTTCCTATGGCCCGGAAGCAGCGCTCACCGTGCTCATTCCGCTCG
GCGCGCTCGGCCTGGGCTATATCGGCCCGGTGATCGGCTGCATCGTCGGTCTGCTGGCGATCCTCTATTTCTCCTACAGA
CAGACGCTCGCGGCCTATCCGACGAACGGCGGTGCCTATGTCGTGGCGAAGGAAAATCTCGGAGAATATCCGAGCCTGCT
TGCCGCCGCGGCGCTGATGATCGACTACGTGCTGAATGTCGCGGTCGGCGTTTCAGCCGGTGTGGGAGCACTCGTCTCGG
CAATACCCGACCTTCACCCTTATATCCTGCCCCTGTGCCTCGGCATCGTTCTCCTCGTCACGCTGGCCAATTTGCGCGGA
ACCGGGGAGGCCGGCTGGCTGTTCGCCCTGCCGACCTATGTATTCGTTATCTGTTTCCTGGGCGCCATCGGCTATGGACT
GGTCGGGATCGGCCTGGGAGAGAGGCCGGCACCCATTGTCGAGCCGCCGCCGCTCGCTCCGACTGCTGAAGGCGCAACGC
TCTGGCTGCTGATGCACGCATTTGCCAGCGGCTGCACCGCCATGACCGGCGTGGAAGCTGTTTCCAATGGCATGGGCTCC
TTCAGGCAACCTGTCATGCGAAACGCCTACCTCACTCTCACGATTATCGTCGTTATTCTCGGTCTGTTGCTCGGCGGTAT
CGCGACCCTCGCCACCGCCTTTGAGATTGGTGCAATGGATCAGACGAAGGAAGGCTATCAGAGCGTGCTGTCGCAGCTGC
TTGCCGCCGTTGCCGGCCATGGTGCCTTTTATTACATCGCGATGACAAGCCTCCTCAGTGTCCTGTGCCTCTCCGCCAAT
ACCAGTTTTGTCGGTTTTCCGCGTCTCTGCCAGATGGTGGCTGCCGATGGCTATCTGCCCAAAGCCTTTGCTCAACCCGG
CCGCCGGCTCGTGTTTACCGCCGGCATCCTATTCCTCTCCGGCGTCGCCGGGCTGCTTCTGCTCGCCTTCGGAGGGATTA
CCGACAATTTGATCCCGCTCTTTGCAATCGGCGCCTTTTTGACTTTCACGATTTCTCAGGCAGGCATGACCGTGCATTGG
CGCCGCCGGTCCACGCACCACAGAGCAAAGCTGGTCATGAACGGCCTCGGCGCGGTCTCGACAGCGACGGCGCTCATCAT
CATACTGGTGGCGAAATTTGCCGAAGGCGCGTGGATCACGCTGATGGCCGTCCCGATGGCGATCCTCGTCCTGAAGTCGG
TCAAGAGCTACTATGCCTCTCTTCAACGCGAACTGCGGAAGCCTGGTCCGATCACCATCGAAGATATCGAACCGCCGACG
GTTCTGGTCGTCACCGAGACGTGGAACAGATTGAGCGAGCGCGCCATTAAATTTGCGCTGACAATCTCGCCCGACGTCGT
CGCCGTCCATTTCATTCGTCTCGGCGGGCCGGACCGCGAGGAGGGCGAAAACGGGCTTCGCGAGGAATGGCGTGTTGACG
TGGAAGAGCCGATCGCGGCACGCGGATTGAAGCCGCCAAGGCTGATGCTCATTCCCGCTCCTTATCGGCAATTGCACGAA
CCGCTGCTGCGGCTGATCGAAAAGCTGGATGCCGACAGTCCCGAGAGGCGGGTTGCGGTTCTCATTCCCGAAACCGTCAA
GGACAGATGGTGGCAGAAGCTTCTGCACATGAACAGGGCGGGGCGGTTGCGGACGAAACTCGTCAGGCTCGGAGGACCAC
GGCTGACGGTGGCTACGGTCCCGTGGCGGCTTTATCGGGAGGAGCAGACGGCGTGA

Upstream 100 bases:

>100_bases
CCGGGCCGGTCTTTCGATCGCATCTTTCTATGGCTGTGCCTCGGGAACCCGCGCGTTCCCCGCTTGTTGGTTATCGCCCA
GCCTGGATAAGGAATGAAAA

Downstream 100 bases:

>100_bases
ACGCTTTTTGCTCGATGCAGCCTTGGAACTTAGTCGGAAGAGCGAAGTTGGGCAGGCATCAGCAAGAGGCGCCAATGTCC
ATCAATCCCTTGATGAGCGA

Product: putative aminoacid/polyamine transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 631; Mature: 631

Protein sequence:

>631_residues
MNLSTLLFGRRLANREHEDKKIGWIAAVPAMGLDGLGSSSYGPEAALTVLIPLGALGLGYIGPVIGCIVGLLAILYFSYR
QTLAAYPTNGGAYVVAKENLGEYPSLLAAAALMIDYVLNVAVGVSAGVGALVSAIPDLHPYILPLCLGIVLLVTLANLRG
TGEAGWLFALPTYVFVICFLGAIGYGLVGIGLGERPAPIVEPPPLAPTAEGATLWLLMHAFASGCTAMTGVEAVSNGMGS
FRQPVMRNAYLTLTIIVVILGLLLGGIATLATAFEIGAMDQTKEGYQSVLSQLLAAVAGHGAFYYIAMTSLLSVLCLSAN
TSFVGFPRLCQMVAADGYLPKAFAQPGRRLVFTAGILFLSGVAGLLLLAFGGITDNLIPLFAIGAFLTFTISQAGMTVHW
RRRSTHHRAKLVMNGLGAVSTATALIIILVAKFAEGAWITLMAVPMAILVLKSVKSYYASLQRELRKPGPITIEDIEPPT
VLVVTETWNRLSERAIKFALTISPDVVAVHFIRLGGPDREEGENGLREEWRVDVEEPIAARGLKPPRLMLIPAPYRQLHE
PLLRLIEKLDADSPERRVAVLIPETVKDRWWQKLLHMNRAGRLRTKLVRLGGPRLTVATVPWRLYREEQTA

Sequences:

>Translated_631_residues
MNLSTLLFGRRLANREHEDKKIGWIAAVPAMGLDGLGSSSYGPEAALTVLIPLGALGLGYIGPVIGCIVGLLAILYFSYR
QTLAAYPTNGGAYVVAKENLGEYPSLLAAAALMIDYVLNVAVGVSAGVGALVSAIPDLHPYILPLCLGIVLLVTLANLRG
TGEAGWLFALPTYVFVICFLGAIGYGLVGIGLGERPAPIVEPPPLAPTAEGATLWLLMHAFASGCTAMTGVEAVSNGMGS
FRQPVMRNAYLTLTIIVVILGLLLGGIATLATAFEIGAMDQTKEGYQSVLSQLLAAVAGHGAFYYIAMTSLLSVLCLSAN
TSFVGFPRLCQMVAADGYLPKAFAQPGRRLVFTAGILFLSGVAGLLLLAFGGITDNLIPLFAIGAFLTFTISQAGMTVHW
RRRSTHHRAKLVMNGLGAVSTATALIIILVAKFAEGAWITLMAVPMAILVLKSVKSYYASLQRELRKPGPITIEDIEPPT
VLVVTETWNRLSERAIKFALTISPDVVAVHFIRLGGPDREEGENGLREEWRVDVEEPIAARGLKPPRLMLIPAPYRQLHE
PLLRLIEKLDADSPERRVAVLIPETVKDRWWQKLLHMNRAGRLRTKLVRLGGPRLTVATVPWRLYREEQTA
>Mature_631_residues
MNLSTLLFGRRLANREHEDKKIGWIAAVPAMGLDGLGSSSYGPEAALTVLIPLGALGLGYIGPVIGCIVGLLAILYFSYR
QTLAAYPTNGGAYVVAKENLGEYPSLLAAAALMIDYVLNVAVGVSAGVGALVSAIPDLHPYILPLCLGIVLLVTLANLRG
TGEAGWLFALPTYVFVICFLGAIGYGLVGIGLGERPAPIVEPPPLAPTAEGATLWLLMHAFASGCTAMTGVEAVSNGMGS
FRQPVMRNAYLTLTIIVVILGLLLGGIATLATAFEIGAMDQTKEGYQSVLSQLLAAVAGHGAFYYIAMTSLLSVLCLSAN
TSFVGFPRLCQMVAADGYLPKAFAQPGRRLVFTAGILFLSGVAGLLLLAFGGITDNLIPLFAIGAFLTFTISQAGMTVHW
RRRSTHHRAKLVMNGLGAVSTATALIIILVAKFAEGAWITLMAVPMAILVLKSVKSYYASLQRELRKPGPITIEDIEPPT
VLVVTETWNRLSERAIKFALTISPDVVAVHFIRLGGPDREEGENGLREEWRVDVEEPIAARGLKPPRLMLIPAPYRQLHE
PLLRLIEKLDADSPERRVAVLIPETVKDRWWQKLLHMNRAGRLRTKLVRLGGPRLTVATVPWRLYREEQTA

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002293 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67815; Mature: 67815

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLSTLLFGRRLANREHEDKKIGWIAAVPAMGLDGLGSSSYGPEAALTVLIPLGALGLGY
CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IGPVIGCIVGLLAILYFSYRQTLAAYPTNGGAYVVAKENLGEYPSLLAAAALMIDYVLNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
AVGVSAGVGALVSAIPDLHPYILPLCLGIVLLVTLANLRGTGEAGWLFALPTYVFVICFL
HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
GAIGYGLVGIGLGERPAPIVEPPPLAPTAEGATLWLLMHAFASGCTAMTGVEAVSNGMGS
HHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHH
FRQPVMRNAYLTLTIIVVILGLLLGGIATLATAFEIGAMDQTKEGYQSVLSQLLAAVAGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
GAFYYIAMTSLLSVLCLSANTSFVGFPRLCQMVAADGYLPKAFAQPGRRLVFTAGILFLS
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHH
GVAGLLLLAFGGITDNLIPLFAIGAFLTFTISQAGMTVHWRRRSTHHRAKLVMNGLGAVS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCHHH
TATALIIILVAKFAEGAWITLMAVPMAILVLKSVKSYYASLQRELRKPGPITIEDIEPPT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VLVVTETWNRLSERAIKFALTISPDVVAVHFIRLGGPDREEGENGLREEWRVDVEEPIAA
EEEEECHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHH
RGLKPPRLMLIPAPYRQLHEPLLRLIEKLDADSPERRVAVLIPETVKDRWWQKLLHMNRA
CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
GRLRTKLVRLGGPRLTVATVPWRLYREEQTA
CHHHHHHHHCCCCEEEEEECCHHHHHHCCCC
>Mature Secondary Structure
MNLSTLLFGRRLANREHEDKKIGWIAAVPAMGLDGLGSSSYGPEAALTVLIPLGALGLGY
CCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
IGPVIGCIVGLLAILYFSYRQTLAAYPTNGGAYVVAKENLGEYPSLLAAAALMIDYVLNV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
AVGVSAGVGALVSAIPDLHPYILPLCLGIVLLVTLANLRGTGEAGWLFALPTYVFVICFL
HHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
GAIGYGLVGIGLGERPAPIVEPPPLAPTAEGATLWLLMHAFASGCTAMTGVEAVSNGMGS
HHHHHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCHHH
FRQPVMRNAYLTLTIIVVILGLLLGGIATLATAFEIGAMDQTKEGYQSVLSQLLAAVAGH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
GAFYYIAMTSLLSVLCLSANTSFVGFPRLCQMVAADGYLPKAFAQPGRRLVFTAGILFLS
CHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCEEHHHHHHHHHH
GVAGLLLLAFGGITDNLIPLFAIGAFLTFTISQAGMTVHWRRRSTHHRAKLVMNGLGAVS
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCHHH
TATALIIILVAKFAEGAWITLMAVPMAILVLKSVKSYYASLQRELRKPGPITIEDIEPPT
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCE
VLVVTETWNRLSERAIKFALTISPDVVAVHFIRLGGPDREEGENGLREEWRVDVEEPIAA
EEEEECHHHHHHHHHEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHCCCCCCCHHH
RGLKPPRLMLIPAPYRQLHEPLLRLIEKLDADSPERRVAVLIPETVKDRWWQKLLHMNRA
CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHCCC
GRLRTKLVRLGGPRLTVATVPWRLYREEQTA
CHHHHHHHHCCCCEEEEEECCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]