| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894642
Identifier: 190894642
GI number: 190894642
Start: 327562
End: 327825
Strand: Reverse
Name: 190894642
Synonym: RHECIAT_PC0000305
Alternate gene names: NA
Gene position: 327825-327562 (Counterclockwise)
Preceding gene: 190894643
Following gene: 190894639
Centisome position: 30.03
GC content: 53.41
Gene sequence:
>264_bases ATGAGCAGCTCTGAAACGACGACGGACCACAAGAAGATCCGCAAATGGGCAGAAGACAGGGAAGGCAGGCCGGCCGCCAT CCGGACCCGCGGCAAGGGAGGTGTACTGCGCATCGATTTTGGAGAGAAGGAAGAGGAATTCGACGAAATCGACTGGGACG AATTCTTCAAGATCTTCGACGAAAACAAGCTTGCCTTTCTCTACCAGGACAAGACCAAGGACGGGAAGACAAGCCGCTTC AACAAATTCGTCGAGCGCAACTAA
Upstream 100 bases:
>100_bases CTGGCCGACTGCTCGCGCCGTATCGCGACTGGAGGCAAAGGCAGCCGCTGCTGTGACTGTGGCGGATTTGCGCAAATGCA AAGACTAGACGGAGGTAGAG
Downstream 100 bases:
>100_bases ATGCCCTTCACGCGGCGCTTCCCATCGCCGCGTTTGTGCCGAGGGCCGATGTCATTTGCGGCCAGAGCCCGGCTCCGCCA TTTTCGAATGCTGGTGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 86
Protein sequence:
>87_residues MSSSETTTDHKKIRKWAEDREGRPAAIRTRGKGGVLRIDFGEKEEEFDEIDWDEFFKIFDENKLAFLYQDKTKDGKTSRF NKFVERN
Sequences:
>Translated_87_residues MSSSETTTDHKKIRKWAEDREGRPAAIRTRGKGGVLRIDFGEKEEEFDEIDWDEFFKIFDENKLAFLYQDKTKDGKTSRF NKFVERN >Mature_86_residues SSSETTTDHKKIRKWAEDREGRPAAIRTRGKGGVLRIDFGEKEEEFDEIDWDEFFKIFDENKLAFLYQDKTKDGKTSRFN KFVERN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10368; Mature: 10236
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSETTTDHKKIRKWAEDREGRPAAIRTRGKGGVLRIDFGEKEEEFDEIDWDEFFKIFD CCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHCCCCHHHHHHHHC ENKLAFLYQDKTKDGKTSRFNKFVERN CCCEEEEECCCCCCCCHHHHHHHHCCC >Mature Secondary Structure SSSETTTDHKKIRKWAEDREGRPAAIRTRGKGGVLRIDFGEKEEEFDEIDWDEFFKIFD CCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCHHCCCCHHHHHHHHC ENKLAFLYQDKTKDGKTSRFNKFVERN CCCEEEEECCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA