| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
Click here to switch to the map view.
The map label for this gene is 190894639
Identifier: 190894639
GI number: 190894639
Start: 325073
End: 325453
Strand: Reverse
Name: 190894639
Synonym: RHECIAT_PC0000302
Alternate gene names: NA
Gene position: 325453-325073 (Counterclockwise)
Preceding gene: 190894642
Following gene: 190894636
Centisome position: 29.82
GC content: 61.15
Gene sequence:
>381_bases GTGATCGCGGTGCCGCGGCGTTCGGAACAGAGGGTTGCGGTGCGAGTTCGTCCTGAGGGCGCAAGCAACGGCAAATCCGT CGCTGCGTCCGGCTTGAACCGCAAGCTTCCCATCACGAAGGAGCAAATCATGACTTCGTCCAAACACGCAAAGACCACCA AACCAAGCGATCTCGACCTGTCGGACGACCCAGGTATCGGCCGCTCACGCGGCATCGTATCTCCGCCGGACGACGAAGCG CTGCAGGCCGAAAACACCGTTGAAGGCGATACCGCCAACGATACGACGCCCCCAGGGCGGCGTGGATCCGCGTCGCCGCG GGCGGACCAACATATAGCGGTCACCCTCGACAGAAAGGATCATAACTCGAGTAAAGCGTAA
Upstream 100 bases:
>100_bases TTGCCGTGCCAGGTCAGAGCTCTCACGTCGTTTCTCCTCAGCGCTCGTCGATGGCGCTCCAACCTCAGCTGCTGCGAAAT GTTCCCGTCGAGCGGGGGCT
Downstream 100 bases:
>100_bases GGTTTGCCGGTCGGCTTCTCGACATGGGCGGCGACATTGTAGACCGGGGCGCCGCCCGGTGTGCGACCCTCGTAGGATCC GCGATGCGCATGGCCGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 126; Mature: 126
Protein sequence:
>126_residues MIAVPRRSEQRVAVRVRPEGASNGKSVAASGLNRKLPITKEQIMTSSKHAKTTKPSDLDLSDDPGIGRSRGIVSPPDDEA LQAENTVEGDTANDTTPPGRRGSASPRADQHIAVTLDRKDHNSSKA
Sequences:
>Translated_126_residues MIAVPRRSEQRVAVRVRPEGASNGKSVAASGLNRKLPITKEQIMTSSKHAKTTKPSDLDLSDDPGIGRSRGIVSPPDDEA LQAENTVEGDTANDTTPPGRRGSASPRADQHIAVTLDRKDHNSSKA >Mature_126_residues MIAVPRRSEQRVAVRVRPEGASNGKSVAASGLNRKLPITKEQIMTSSKHAKTTKPSDLDLSDDPGIGRSRGIVSPPDDEA LQAENTVEGDTANDTTPPGRRGSASPRADQHIAVTLDRKDHNSSKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13404; Mature: 13404
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVPRRSEQRVAVRVRPEGASNGKSVAASGLNRKLPITKEQIMTSSKHAKTTKPSDLDL CCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC SDDPGIGRSRGIVSPPDDEALQAENTVEGDTANDTTPPGRRGSASPRADQHIAVTLDRKD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC HNSSKA CCCCCC >Mature Secondary Structure MIAVPRRSEQRVAVRVRPEGASNGKSVAASGLNRKLPITKEQIMTSSKHAKTTKPSDLDL CCCCCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCC SDDPGIGRSRGIVSPPDDEALQAENTVEGDTANDTTPPGRRGSASPRADQHIAVTLDRKD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC HNSSKA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA