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The map label for this gene is yfbG [C]

Identifier: 190894607

GI number: 190894607

Start: 286835

End: 287887

Strand: Reverse

Name: yfbG [C]

Synonym: RHECIAT_PC0000270

Alternate gene names: 190894607

Gene position: 287887-286835 (Counterclockwise)

Preceding gene: 190894608

Following gene: 190894606

Centisome position: 26.37

GC content: 58.97

Gene sequence:

>1053_bases
ATGCACGGACATAAGCGAGTTTTGGTTACCGGCGGCACCGGATTTCTGGGATCATTCCTGTGCGAAAGGCTTTTGCGAGA
AGGTAATGACGTCCTCTGCGTGGACAATTACTACACCGGTTCGCGCGACAATGTGCTGCATCTTCTTGACGATCCTCGCT
TTGAGGTGCTCCGTCACGACATTACCTTCCCGCTTTATGTGGAGGTTGACGAGATCTACAACCTCGCTTGTCCGGCGTCT
CCGGTCCACTATCAGCATGACCCCGTGCAGACGGTGAAGACCAATGTGCACGGGGCCATCAATATGCTCGGCCTGGCCAA
ACGCACCAAGGCGAAGATCTTCCAGGCATCGACGAGCGAAGTTTATGGCGATCCGGCCGTCCACCCCCAGCCGGAGGAGT
ATCGAGGCAGCGTCAATCCCATCGGCCCGCGGGCATGTTATGACGAAGGCAAGCGGTGCGCCGAGACGCTGTTCTTCGAT
TATCATCGTCAATACGGCGTCGAAATCAGGGTGGCGCGAATCTTCAACACCTACGGCCCGCGCATGCAGACCAATGACGG
CCGCGTCGTTTCCAATTTCATCGTTCAGGCACTTCAAAACGAGCCGATCACCATCTTCGGCAACGGCACGCAGACGCGCT
CATTCTGCTATGTGGACGATCTGATCGAGGGCTTCATCCGCCTGATGGGTGCGCCGGCCGGAGTTACCGGCCCGATCAAT
CTCGGTAACCCGGGAGAATTCCAGGTCCGGGAACTGGCTGAAATGGTCATCGAGATGACCGGTTCGAAATCAAGCATCGT
TTACAATCCCTTGCCGATCGACGACCCGACGCAGCGCAAGCCCGACATTTCCCGCGCGACGCAGGACCTCGGCTGGCAGC
CGACGGTGAACCTGCGTGAAGGCCTCGAGAAGACCATCGCGTATTTCGAGTGGAAGCTTTCCGGCGGAGGCAGGAGCATG
GCCGGCGCCCGGGCCGCACGAACGGGTTACGCCCATCTGCCTACTCCGGCCGTCGGCCTTCCTGTTCAGGAAGCCACAGC
GATCCGGCCATGA

Upstream 100 bases:

>100_bases
ACATCCTTCTCAGCACAATTCCTGCGGTCTTGAAGGGCAAGGGAGCTTGCTGAGCTGTTTCTCGTCCTGCGCGCAATCAT
CACAACAATGGAGCACATCA

Downstream 100 bases:

>100_bases
ACAGCCACCCCGATCATTGCAAGCCGGAGCTCGGTTTCTTTCGATGGGATGTGCCGGAAACATGAATGTGCATAACATAC
CAACAGCAGCCGCCCCGGCG

Product: putative dTDP-glucose 4,6-dehydratase

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MHGHKRVLVTGGTGFLGSFLCERLLREGNDVLCVDNYYTGSRDNVLHLLDDPRFEVLRHDITFPLYVEVDEIYNLACPAS
PVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQASTSEVYGDPAVHPQPEEYRGSVNPIGPRACYDEGKRCAETLFFD
YHRQYGVEIRVARIFNTYGPRMQTNDGRVVSNFIVQALQNEPITIFGNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPIN
LGNPGEFQVRELAEMVIEMTGSKSSIVYNPLPIDDPTQRKPDISRATQDLGWQPTVNLREGLEKTIAYFEWKLSGGGRSM
AGARAARTGYAHLPTPAVGLPVQEATAIRP

Sequences:

>Translated_350_residues
MHGHKRVLVTGGTGFLGSFLCERLLREGNDVLCVDNYYTGSRDNVLHLLDDPRFEVLRHDITFPLYVEVDEIYNLACPAS
PVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQASTSEVYGDPAVHPQPEEYRGSVNPIGPRACYDEGKRCAETLFFD
YHRQYGVEIRVARIFNTYGPRMQTNDGRVVSNFIVQALQNEPITIFGNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPIN
LGNPGEFQVRELAEMVIEMTGSKSSIVYNPLPIDDPTQRKPDISRATQDLGWQPTVNLREGLEKTIAYFEWKLSGGGRSM
AGARAARTGYAHLPTPAVGLPVQEATAIRP
>Mature_350_residues
MHGHKRVLVTGGTGFLGSFLCERLLREGNDVLCVDNYYTGSRDNVLHLLDDPRFEVLRHDITFPLYVEVDEIYNLACPAS
PVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQASTSEVYGDPAVHPQPEEYRGSVNPIGPRACYDEGKRCAETLFFD
YHRQYGVEIRVARIFNTYGPRMQTNDGRVVSNFIVQALQNEPITIFGNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPIN
LGNPGEFQVRELAEMVIEMTGSKSSIVYNPLPIDDPTQRKPDISRATQDLGWQPTVNLREGLEKTIAYFEWKLSGGGRSM
AGARAARTGYAHLPTPAVGLPVQEATAIRP

Specific function: Unknown

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family [H]

Homologues:

Organism=Homo sapiens, GI42516563, Length=309, Percent_Identity=56.6343042071197, Blast_Score=379, Evalue=1e-105,
Organism=Homo sapiens, GI7657641, Length=326, Percent_Identity=28.5276073619632, Blast_Score=106, Evalue=4e-23,
Organism=Escherichia coli, GI1788589, Length=337, Percent_Identity=27.5964391691395, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI48994969, Length=338, Percent_Identity=23.6686390532544, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788353, Length=345, Percent_Identity=25.2173913043478, Blast_Score=86, Evalue=5e-18,
Organism=Escherichia coli, GI1786974, Length=339, Percent_Identity=25.9587020648968, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788365, Length=324, Percent_Identity=26.5432098765432, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788366, Length=355, Percent_Identity=25.9154929577465, Blast_Score=78, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17539532, Length=315, Percent_Identity=55.8730158730159, Blast_Score=380, Evalue=1e-106,
Organism=Caenorhabditis elegans, GI17568069, Length=329, Percent_Identity=27.6595744680851, Blast_Score=94, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI115532424, Length=325, Percent_Identity=27.6923076923077, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21356223, Length=314, Percent_Identity=58.2802547770701, Blast_Score=385, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 38842; Mature: 38842

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGHKRVLVTGGTGFLGSFLCERLLREGNDVLCVDNYYTGSRDNVLHLLDDPRFEVLRHD
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHC
ITFPLYVEVDEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQASTSE
CCCEEEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VYGDPAVHPQPEEYRGSVNPIGPRACYDEGKRCAETLFFDYHRQYGVEIRVARIFNTYGP
HCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
RMQTNDGRVVSNFIVQALQNEPITIFGNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPIN
CEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCC
LGNPGEFQVRELAEMVIEMTGSKSSIVYNPLPIDDPTQRKPDISRATQDLGWQPTVNLRE
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH
GLEKTIAYFEWKLSGGGRSMAGARAARTGYAHLPTPAVGLPVQEATAIRP
HHHHHHHEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCC
>Mature Secondary Structure
MHGHKRVLVTGGTGFLGSFLCERLLREGNDVLCVDNYYTGSRDNVLHLLDDPRFEVLRHD
CCCCCEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCHHHHHHHC
ITFPLYVEVDEIYNLACPASPVHYQHDPVQTVKTNVHGAINMLGLAKRTKAKIFQASTSE
CCCEEEEEHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
VYGDPAVHPQPEEYRGSVNPIGPRACYDEGKRCAETLFFDYHRQYGVEIRVARIFNTYGP
HCCCCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCC
RMQTNDGRVVSNFIVQALQNEPITIFGNGTQTRSFCYVDDLIEGFIRLMGAPAGVTGPIN
CEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHHCCCCCCCCCCC
LGNPGEFQVRELAEMVIEMTGSKSSIVYNPLPIDDPTQRKPDISRATQDLGWQPTVNLRE
CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHH
GLEKTIAYFEWKLSGGGRSMAGARAARTGYAHLPTPAVGLPVQEATAIRP
HHHHHHHEEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]