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The map label for this gene is 190894561

Identifier: 190894561

GI number: 190894561

Start: 222535

End: 223353

Strand: Reverse

Name: 190894561

Synonym: RHECIAT_PC0000223

Alternate gene names: NA

Gene position: 223353-222535 (Counterclockwise)

Preceding gene: 190894562

Following gene: 190894559

Centisome position: 20.46

GC content: 62.64

Gene sequence:

>819_bases
TTGACCCGTAGGAACGACATTTTGAACAAGCTTCGCCGCAAGATCTCCGAGGGCCGGCCGATCATCGGCGGCGGCGCTGG
CACCGGCCTTTCGGCCAAGAGCGAGGAGGCCGGCGGCATCGATCTGATCGTGATCTACAATTCCGGTCGTTACCGCATGG
CCGGGCGCGGCTCGCTGGTAGGCCTGCTCGCCTATGGCAATGCCAATGAAATCGTGAAAGAGATGGGCCGCGAGGTTCTG
CCGGTCGTGCGACACACGCCGGTGCTGGCCGGCGTCAACGGCACCGATCCCTTCATGCTGCCCGATTTCTTCCTCGACGA
GTTGAAGGCGATGGGTTTTGCCGGCATCCAGAACTTTCCCACCGTCGGGCTGATCGATGGCACCTTCCGCGCCAATCTCG
AAGAAACCGGCATGGGCTTCGATCTCGAGATCGATATCATCGCCCGCGCCAACGCCAAGGACATGCTGACGACGCCCTAT
GTCTTCAGTGCCGAGGACGCCATTGCCATGACCCGGGCCGGCGCCGATATCGTCGTCTGCCATCTCGGCTTGACCACGGG
GGGCGCGATCGGCGCCGAAACGGCGCTGACGCTCGACGGATGCGTGGAGAAGATCAACGCATGGACGGATGCCGCCAGAT
CCGTGCGCGACGACGTCATCGTGCTCTGCCATGGCGGGCCGATCTCCATGCCTGCGGATGCCGCTTACGTGCTCGCCCGC
TGCAAGGGATGCAACGGCTTTTACGGCGCAAGTTCGATGGAGCGGTTGCCGACCGAAGTCGCGATCCGGGCACAGGTCGA
GGATTTCGTAAAGATTTAG

Upstream 100 bases:

>100_bases
AACAGACGTCTTGTCGAGGTCGACGCCCATATCAACACCCCGGAATTCGCCGCCGCACTCGTTGCCAATTTCCATGACAT
CCATGCCTGAGGAGAGAGTT

Downstream 100 bases:

>100_bases
GCGCGGCTTGGCCACGCCAGCTGCCGGCGCCTCCGAGGTGGGGCGCCAGCAGCAAAAGCGGTCAGGGCATGACCATCGCA
CCGGCGGTTTCCGGGAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MTRRNDILNKLRRKISEGRPIIGGGAGTGLSAKSEEAGGIDLIVIYNSGRYRMAGRGSLVGLLAYGNANEIVKEMGREVL
PVVRHTPVLAGVNGTDPFMLPDFFLDELKAMGFAGIQNFPTVGLIDGTFRANLEETGMGFDLEIDIIARANAKDMLTTPY
VFSAEDAIAMTRAGADIVVCHLGLTTGGAIGAETALTLDGCVEKINAWTDAARSVRDDVIVLCHGGPISMPADAAYVLAR
CKGCNGFYGASSMERLPTEVAIRAQVEDFVKI

Sequences:

>Translated_272_residues
MTRRNDILNKLRRKISEGRPIIGGGAGTGLSAKSEEAGGIDLIVIYNSGRYRMAGRGSLVGLLAYGNANEIVKEMGREVL
PVVRHTPVLAGVNGTDPFMLPDFFLDELKAMGFAGIQNFPTVGLIDGTFRANLEETGMGFDLEIDIIARANAKDMLTTPY
VFSAEDAIAMTRAGADIVVCHLGLTTGGAIGAETALTLDGCVEKINAWTDAARSVRDDVIVLCHGGPISMPADAAYVLAR
CKGCNGFYGASSMERLPTEVAIRAQVEDFVKI
>Mature_271_residues
TRRNDILNKLRRKISEGRPIIGGGAGTGLSAKSEEAGGIDLIVIYNSGRYRMAGRGSLVGLLAYGNANEIVKEMGREVLP
VVRHTPVLAGVNGTDPFMLPDFFLDELKAMGFAGIQNFPTVGLIDGTFRANLEETGMGFDLEIDIIARANAKDMLTTPYV
FSAEDAIAMTRAGADIVVCHLGLTTGGAIGAETALTLDGCVEKINAWTDAARSVRDDVIVLCHGGPISMPADAAYVLARC
KGCNGFYGASSMERLPTEVAIRAQVEDFVKI

Specific function: Unknown

COG id: COG5564

COG function: function code R; Predicted TIM-barrel enzyme, possibly a dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR009215 [H]

Pfam domain/function: PF09370 TIM-br_sig_trns [H]

EC number: NA

Molecular weight: Translated: 28901; Mature: 28769

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRNDILNKLRRKISEGRPIIGGGAGTGLSAKSEEAGGIDLIVIYNSGRYRMAGRGSLV
CCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEE
GLLAYGNANEIVKEMGREVLPVVRHTPVLAGVNGTDPFMLPDFFLDELKAMGFAGIQNFP
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TVGLIDGTFRANLEETGMGFDLEIDIIARANAKDMLTTPYVFSAEDAIAMTRAGADIVVC
EEEEECCCEECCHHHCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCEEEEECCCEEEEE
HLGLTTGGAIGAETALTLDGCVEKINAWTDAARSVRDDVIVLCHGGPISMPADAAYVLAR
EECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
CKGCNGFYGASSMERLPTEVAIRAQVEDFVKI
HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRRNDILNKLRRKISEGRPIIGGGAGTGLSAKSEEAGGIDLIVIYNSGRYRMAGRGSLV
CCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCEEEEEEECCCEEEEECCCCEE
GLLAYGNANEIVKEMGREVLPVVRHTPVLAGVNGTDPFMLPDFFLDELKAMGFAGIQNFP
EEEEECCHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCC
TVGLIDGTFRANLEETGMGFDLEIDIIARANAKDMLTTPYVFSAEDAIAMTRAGADIVVC
EEEEECCCEECCHHHCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCEEEEECCCEEEEE
HLGLTTGGAIGAETALTLDGCVEKINAWTDAARSVRDDVIVLCHGGPISMPADAAYVLAR
EECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHH
CKGCNGFYGASSMERLPTEVAIRAQVEDFVKI
HCCCCCCCCCCHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]