Click here to switch to the map view.

The map label for this gene is sufS [C]

Identifier: 190894530

GI number: 190894530

Start: 192474

End: 193565

Strand: Reverse

Name: sufS [C]

Synonym: RHECIAT_PC0000192

Alternate gene names: 190894530

Gene position: 193565-192474 (Counterclockwise)

Preceding gene: 190894531

Following gene: 190894529

Centisome position: 17.73

GC content: 68.86

Gene sequence:

>1092_bases
ATGTTCGATCTCGGTTGGAATCCCCTGCTCGGCGCGCCTTTGTATCCCGCGGAGCGCTACGCCATGCTCGCTGACAGAAT
CGGGGGCATTCTGGGCTGCCGGGGTGACGTCGTGCTGGTGCAGGCAGAGGCGGTGGTGGCGCTGGAAGCGGTGGCGGTCA
GTCTCGCGCGTCCCGGCCTTTCAACCCTCAACCTCGTCACCAGTCCCTATGGCGACTGGTTCGGGCAGTGGCTGCGGCGA
GGCGGCGCAACCGTTCGGAATCTCGTCGCCGAACCGGGCCTGCCGGTCGAGATTGACGCCGTCGCCAAAGCGCTCGATGC
CGGCCCTCACATCGATGTGCTCGCCGTGGTTCACGCGGAATCTGCGAGCGGCATTCTCAACCCGCTGCCAGAGATCCTCA
CGCTGGCGCGCGCCCGCGGCATCGTCACCGTCGTCGATGCGGTCGCCTCGGTCGGCGGACATCAGCTCGAGGTCGACGAT
CTCGGCATCGACATCGCGGTGATCGGTCCGCAGAAGGCGCTCGGTGGTCCGGCGGGGGTCTCTGCGCTCTCCATCAGTCA
GCGTGCCTGGGATCTCATTCTCAAGGACGGCGCCCCGCGCGAATCGATCCTGTCGCTGGCCGATCTGAAGCGATGGATCG
ACGACGGCCGGCGCGTCCTGCCGGGAACGCCGGCGCCGCTGGAATTCTTTGCGCTGGAGGCCGCGCTCGACCGCGTCGAG
GCCGAGGGGCTGGAGAATGTCATTGCCCGCCATGCGCTGGCGGCATCGGCGACGCGGGCCGGGCTTGCCGCACTCGGCGC
CGGAAGCTGGGTGCCGGCGGCAAAGGCTTCGAACCTGGTGACGGCGGTACGGATGCCGGAGGGGCTGGCGCCGGCGGCGC
TGATCGCATCCGCAGGGCGCCTGGGGGTCGAACTGGCCGCAGGCACCGGGGCCGCCGCCCATCTCCTACGGCTGAATCAC
ACAGGTCCGCGTGCCGCATTCCAGACGGTGCTGTCGAACGTCGTCGCCTGCGGCGCAGCCCTCAGGCATGCCGGCCGTGC
CGCGAATATCGCCGCCGCTGTAGAGGCGATAGCTGGAGCCTACAGTAGCTGA

Upstream 100 bases:

>100_bases
CGGCCGCGGCGGTTGTCGCCGCACCGCAATCGGCTGCCGGCCGCGCGCTCGTGGCAGCCGTCCCTCGTCTTGTGACCGAA
CCGTTGTGAAGGAGGCGTCC

Downstream 100 bases:

>100_bases
AACCTATATTCGGATCTTGATAATTGCGGCTTGGCAAGGCAGGAAAGTGGCATCGCGGAGACCGGATGCAGATGACGAGA
TTGCTGGATACGCAAGGCCT

Product: putative aspartate aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 363; Mature: 363

Protein sequence:

>363_residues
MFDLGWNPLLGAPLYPAERYAMLADRIGGILGCRGDVVLVQAEAVVALEAVAVSLARPGLSTLNLVTSPYGDWFGQWLRR
GGATVRNLVAEPGLPVEIDAVAKALDAGPHIDVLAVVHAESASGILNPLPEILTLARARGIVTVVDAVASVGGHQLEVDD
LGIDIAVIGPQKALGGPAGVSALSISQRAWDLILKDGAPRESILSLADLKRWIDDGRRVLPGTPAPLEFFALEAALDRVE
AEGLENVIARHALAASATRAGLAALGAGSWVPAAKASNLVTAVRMPEGLAPAALIASAGRLGVELAAGTGAAAHLLRLNH
TGPRAAFQTVLSNVVACGAALRHAGRAANIAAAVEAIAGAYSS

Sequences:

>Translated_363_residues
MFDLGWNPLLGAPLYPAERYAMLADRIGGILGCRGDVVLVQAEAVVALEAVAVSLARPGLSTLNLVTSPYGDWFGQWLRR
GGATVRNLVAEPGLPVEIDAVAKALDAGPHIDVLAVVHAESASGILNPLPEILTLARARGIVTVVDAVASVGGHQLEVDD
LGIDIAVIGPQKALGGPAGVSALSISQRAWDLILKDGAPRESILSLADLKRWIDDGRRVLPGTPAPLEFFALEAALDRVE
AEGLENVIARHALAASATRAGLAALGAGSWVPAAKASNLVTAVRMPEGLAPAALIASAGRLGVELAAGTGAAAHLLRLNH
TGPRAAFQTVLSNVVACGAALRHAGRAANIAAAVEAIAGAYSS
>Mature_363_residues
MFDLGWNPLLGAPLYPAERYAMLADRIGGILGCRGDVVLVQAEAVVALEAVAVSLARPGLSTLNLVTSPYGDWFGQWLRR
GGATVRNLVAEPGLPVEIDAVAKALDAGPHIDVLAVVHAESASGILNPLPEILTLARARGIVTVVDAVASVGGHQLEVDD
LGIDIAVIGPQKALGGPAGVSALSISQRAWDLILKDGAPRESILSLADLKRWIDDGRRVLPGTPAPLEFFALEAALDRVE
AEGLENVIARHALAASATRAGLAALGAGSWVPAAKASNLVTAVRMPEGLAPAALIASAGRLGVELAAGTGAAAHLLRLNH
TGPRAAFQTVLSNVVACGAALRHAGRAANIAAAVEAIAGAYSS

Specific function: Cysteine Desulfurases Mobilize The Sulfur From L- Cysteine To Yield L-Alanine, An Essential Step In Sulfur Metabolism For Biosynthesis Of A Variety Of Sulfur-Containing Biomolecules. Component Of The Suf Operon, Which Is Activated And Required Under Speci

COG id: COG0075

COG function: function code E; Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Homo sapiens, GI4557289, Length=317, Percent_Identity=29.0220820189274, Blast_Score=95, Evalue=1e-19,
Organism=Escherichia coli, GI1787970, Length=174, Percent_Identity=29.3103448275862, Blast_Score=63, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI17536281, Length=295, Percent_Identity=28.8135593220339, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321079, Length=285, Percent_Identity=27.0175438596491, Blast_Score=76, Evalue=9e-15,
Organism=Drosophila melanogaster, GI17530823, Length=290, Percent_Identity=27.9310344827586, Blast_Score=91, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: 2.6.1.-

Molecular weight: Translated: 37011; Mature: 37011

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDLGWNPLLGAPLYPAERYAMLADRIGGILGCRGDVVLVQAEAVVALEAVAVSLARPGL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
STLNLVTSPYGDWFGQWLRRGGATVRNLVAEPGLPVEIDAVAKALDAGPHIDVLAVVHAE
HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHCCCCCEEEEEEEECC
SASGILNPLPEILTLARARGIVTVVDAVASVGGHQLEVDDLGIDIAVIGPQKALGGPAGV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHCCCCCCC
SALSISQRAWDLILKDGAPRESILSLADLKRWIDDGRRVLPGTPAPLEFFALEAALDRVE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHH
AEGLENVIARHALAASATRAGLAALGAGSWVPAAKASNLVTAVRMPEGLAPAALIASAGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCCCCHHHHHHHCCC
LGVELAAGTGAAAHLLRLNHTGPRAAFQTVLSNVVACGAALRHAGRAANIAAAVEAIAGA
CCEEEECCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
YSS
CCC
>Mature Secondary Structure
MFDLGWNPLLGAPLYPAERYAMLADRIGGILGCRGDVVLVQAEAVVALEAVAVSLARPGL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCHHCCCCCCEEEEEHHHHHHHHHHHHHHHCCCC
STLNLVTSPYGDWFGQWLRRGGATVRNLVAEPGLPVEIDAVAKALDAGPHIDVLAVVHAE
HHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCEEHHHHHHHHCCCCCEEEEEEEECC
SASGILNPLPEILTLARARGIVTVVDAVASVGGHQLEVDDLGIDIAVIGPQKALGGPAGV
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEECCCEEEEEECCHHHCCCCCCC
SALSISQRAWDLILKDGAPRESILSLADLKRWIDDGRRVLPGTPAPLEFFALEAALDRVE
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHHH
AEGLENVIARHALAASATRAGLAALGAGSWVPAAKASNLVTAVRMPEGLAPAALIASAGR
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCEEEEECCCCCCHHHHHHHCCC
LGVELAAGTGAAAHLLRLNHTGPRAAFQTVLSNVVACGAALRHAGRAANIAAAVEAIAGA
CCEEEECCCCHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC
YSS
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]