| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894529
Identifier: 190894529
GI number: 190894529
Start: 191539
End: 192408
Strand: Reverse
Name: 190894529
Synonym: RHECIAT_PC0000191
Alternate gene names: NA
Gene position: 192408-191539 (Counterclockwise)
Preceding gene: 190894530
Following gene: 190894521
Centisome position: 17.63
GC content: 62.64
Gene sequence:
>870_bases ATGCAGATGACGAGATTGCTGGATACGCAAGGCCTGGAAATTTTCCACGAGGGACATCGCACTCGCCTGAAATGGCACCG GCTGCGTAAGCGCCTTACCGATCCGTTGTTCTCTGCCGAGGTGATGGCGGAGGGTTTTGCGACAGGCGCCTCGATGGAGC TCGATCTGCGCGTGCGCGCCGACGGCGGTTTCGTCGTGCTGCACGACAGCGAGCTCGAAGGTGAAACGACAGGCCATGGA CCGATCGCCGGCACGAGCCTCGCTGACCTCCGCAAGATCAGGATGAAGGACGGGGACCGGCCGCTGATCCTCAGCGAGGA TCTCGCCGGCATGATGCAATCATCGCACCCGGCGGCACTGCTGCAATTCGACATCAAGGACGATTACGAAGCGATCGGCG TCAGCGGTATAGCGCACCTTGCCCAACAGTTCCGCGATGTCTCCGCCTCGGTAATCGTCAGCGCCGGCAGTCTCGACCTC ATCGTCGCCGTCAAGGAAAAGCTTCCGCATCTGCTGCGCGGCATCGACCCGACCGACAAGCTTTACGATATCAGGCAGGC CGGCGGTTGGAAGGCGGTCGAAACGGAATTGCGCGCCGACCTCAGCGGCCCGTCCGAACCGGACACGGTCTATCTCCACT GGCCGCTGATCCTTGCTGCCGCCAAGGATGGCCTCGACATGATAGGCCTCTGCCGTGACGAAGGCAAACGCGTCGATGCA TGGACCTTCACGCTGAAGGATCCGGAGGCTGGGTTCAGCGAAGACGAATGGCGGAGCTTTTCGGCGCTGATGGCGCTGAA GCCGGATCAGATCACCACGGACGAGGCGACGGCGACCGAACGCGCCTGGCGCCGACGCGTGGCCGGCTAA
Upstream 100 bases:
>100_bases CTGTAGAGGCGATAGCTGGAGCCTACAGTAGCTGAAACCTATATTCGGATCTTGATAATTGCGGCTTGGCAAGGCAGGAA AGTGGCATCGCGGAGACCGG
Downstream 100 bases:
>100_bases CTCGCCCGGAAAGGTGCAGCCGCTCCAGACGACGGGATGCCTTCAGCAGCGGGCTTTAGCCGGCGAGTGACAGCCCCTCG TTCTCAAGGATGAAGGCGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MQMTRLLDTQGLEIFHEGHRTRLKWHRLRKRLTDPLFSAEVMAEGFATGASMELDLRVRADGGFVVLHDSELEGETTGHG PIAGTSLADLRKIRMKDGDRPLILSEDLAGMMQSSHPAALLQFDIKDDYEAIGVSGIAHLAQQFRDVSASVIVSAGSLDL IVAVKEKLPHLLRGIDPTDKLYDIRQAGGWKAVETELRADLSGPSEPDTVYLHWPLILAAAKDGLDMIGLCRDEGKRVDA WTFTLKDPEAGFSEDEWRSFSALMALKPDQITTDEATATERAWRRRVAG
Sequences:
>Translated_289_residues MQMTRLLDTQGLEIFHEGHRTRLKWHRLRKRLTDPLFSAEVMAEGFATGASMELDLRVRADGGFVVLHDSELEGETTGHG PIAGTSLADLRKIRMKDGDRPLILSEDLAGMMQSSHPAALLQFDIKDDYEAIGVSGIAHLAQQFRDVSASVIVSAGSLDL IVAVKEKLPHLLRGIDPTDKLYDIRQAGGWKAVETELRADLSGPSEPDTVYLHWPLILAAAKDGLDMIGLCRDEGKRVDA WTFTLKDPEAGFSEDEWRSFSALMALKPDQITTDEATATERAWRRRVAG >Mature_289_residues MQMTRLLDTQGLEIFHEGHRTRLKWHRLRKRLTDPLFSAEVMAEGFATGASMELDLRVRADGGFVVLHDSELEGETTGHG PIAGTSLADLRKIRMKDGDRPLILSEDLAGMMQSSHPAALLQFDIKDDYEAIGVSGIAHLAQQFRDVSASVIVSAGSLDL IVAVKEKLPHLLRGIDPTDKLYDIRQAGGWKAVETELRADLSGPSEPDTVYLHWPLILAAAKDGLDMIGLCRDEGKRVDA WTFTLKDPEAGFSEDEWRSFSALMALKPDQITTDEATATERAWRRRVAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31987; Mature: 31987
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQMTRLLDTQGLEIFHEGHRTRLKWHRLRKRLTDPLFSAEVMAEGFATGASMELDLRVRA CCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEC DGGFVVLHDSELEGETTGHGPIAGTSLADLRKIRMKDGDRPLILSEDLAGMMQSSHPAAL CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCEEE LQFDIKDDYEAIGVSGIAHLAQQFRDVSASVIVSAGSLDLIVAVKEKLPHLLRGIDPTDK EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHCCCCCHH LYDIRQAGGWKAVETELRADLSGPSEPDTVYLHWPLILAAAKDGLDMIGLCRDEGKRVDA HHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEHEEEEHHHCCCCEEEEECCCCCEEEE WTFTLKDPEAGFSEDEWRSFSALMALKPDQITTDEATATERAWRRRVAG EEEEECCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQMTRLLDTQGLEIFHEGHRTRLKWHRLRKRLTDPLFSAEVMAEGFATGASMELDLRVRA CCCHHHHCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEEC DGGFVVLHDSELEGETTGHGPIAGTSLADLRKIRMKDGDRPLILSEDLAGMMQSSHPAAL CCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECHHHHHHHHCCCCEEE LQFDIKDDYEAIGVSGIAHLAQQFRDVSASVIVSAGSLDLIVAVKEKLPHLLRGIDPTDK EEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEHHHHHHHHHCCCCCHH LYDIRQAGGWKAVETELRADLSGPSEPDTVYLHWPLILAAAKDGLDMIGLCRDEGKRVDA HHHHHHCCCCHHHHHHHHHCCCCCCCCCEEEEEEHEEEEHHHCCCCEEEEECCCCCEEEE WTFTLKDPEAGFSEDEWRSFSALMALKPDQITTDEATATERAWRRRVAG EEEEECCCCCCCCHHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA