Definition Rhizobium etli CIAT 652 plasmid pC, complete sequence.
Accession NC_010997
Length 1,091,523

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The map label for this gene is 190894520

Identifier: 190894520

GI number: 190894520

Start: 182492

End: 183493

Strand: Reverse

Name: 190894520

Synonym: RHECIAT_PC0000182

Alternate gene names: NA

Gene position: 183493-182492 (Counterclockwise)

Preceding gene: 190894521

Following gene: 190894518

Centisome position: 16.81

GC content: 66.27

Gene sequence:

>1002_bases
ATGCCGAGTGCCGTTTCGCGTTTTGCCAGGATCGCCGCCATTGCCGTACTGACGAGCGCTACCGTTTTTGCCACGATCAG
CGATGCCGATGCGCGCCGCGCCGGCGGATTCGGTGGATTCGGAAGCCGCGGCACGCGGACCTTCAGCGCCCCACCGGTCA
CTCGCACCGCACCTGCCCCGGCTGCGCCGATCGAACGCTCGATGACGCCACGCCCGCAGACGACCGCACCCTACAACACG
CAGCAGCCCGGCTATGCCCAGCAGCGCCCTGGCTTCTTCAACGGCTTCGGCCGTTCGATGATCGGCGGCCTGATTGCCGG
CGGCCTTCTCGGCATGCTGCTCGGTCACGGTTTCGGCGGTGGCTTCGGCTTCCTCGGCATGTTGCTGCAGATCGCCCTGA
TCGGCGGCGCCATCATGCTGGCGATGCGTTATTTCGCCAACCGCCGCCAGCCTTCTTATGGCGCCGGCGGCCAGAGCCGG
TCCTATAGCATGTCGCCCACCAACAATGCGTCCTTCCAGATTCCGGCGATCGGTTCGGGCGCCGGTTTCGGCGGGCAGTC
GCGCGGCAACCGGCCGAGCGATGAGATCGGGCTGGCCCAGGCCGACCTCGACCAGTTCGAGGAATTGCTGACCAACGTTC
AGACCGCTTACGGAGCCGAGGATTACGGCACACTGCGCCGACTGACGACGCCCGAGGCAATGTCCTATCTTGCCGAGGAG
CTCGGCGAAAACGCCACCAACGGCGTGCGCAACCGCGTCTCCGACGTCAAGCTGCTGCAGGGCGATATCGCCGAAGCCTG
GCGCGAGGACGGCCAGGAATATGCGACGCTCGCCATGCGCTATTCCTCAATCGACGCCATGGTCGAGCGCGACAGTGGCC
GTGTCGTTTCCGGCGACGACCGCCGTCCGAGCGAGAGCACCGAGATATGGACGTTCGTGCGCAAGCCCGGCGGGGACTGG
AAGCTTGCCGCAATCCAGGGAACCGGGCAGCGCGCCGCTTAA

Upstream 100 bases:

>100_bases
CGATGTCTGCCAGTAAAGCGGCCGAGAACTTCAAACGGCGGAAACAGTACCTATATTCTATCCCGACATGCCGTGATTGT
GCATGACAGGAGACCAAGAA

Downstream 100 bases:

>100_bases
CGAAAGCCAACGAAAGCACTTGTGATGCCGCCCAAGCTGCTGGTCAGCTCGGGCGGCGTTTTAGTTGACCGCGACCGGCT
TGGAGCGCATGCGGGAAACG

Product: putative import inner membrane translocase, TIM family

Products: NA

Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family; Lipoprotein

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAPAAPIERSMTPRPQTTAPYNT
QQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGGGFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSR
SYSMSPTNNASFQIPAIGSGAGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE
LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDDRRPSESTEIWTFVRKPGGDW
KLAAIQGTGQRAA

Sequences:

>Translated_333_residues
MPSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAPAAPIERSMTPRPQTTAPYNT
QQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGGGFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSR
SYSMSPTNNASFQIPAIGSGAGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE
LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDDRRPSESTEIWTFVRKPGGDW
KLAAIQGTGQRAA
>Mature_332_residues
PSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAPAAPIERSMTPRPQTTAPYNTQ
QPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGGGFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSRS
YSMSPTNNASFQIPAIGSGAGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEEL
GENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDDRRPSESTEIWTFVRKPGGDWK
LAAIQGTGQRAA

Specific function: Unknown

COG id: COG4395

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35287; Mature: 35156

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAP
CCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC
AAPIERSMTPRPQTTAPYNTQQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGG
CCCHHCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSRSYSMSPTNNASFQIPAIGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
AGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE
CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCC
RRPSESTEIWTFVRKPGGDWKLAAIQGTGQRAA
CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
PSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAP
CHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC
AAPIERSMTPRPQTTAPYNTQQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGG
CCCHHCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSRSYSMSPTNNASFQIPAIGSG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
AGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE
CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH
LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDD
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCC
RRPSESTEIWTFVRKPGGDWKLAAIQGTGQRAA
CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA