| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894520
Identifier: 190894520
GI number: 190894520
Start: 182492
End: 183493
Strand: Reverse
Name: 190894520
Synonym: RHECIAT_PC0000182
Alternate gene names: NA
Gene position: 183493-182492 (Counterclockwise)
Preceding gene: 190894521
Following gene: 190894518
Centisome position: 16.81
GC content: 66.27
Gene sequence:
>1002_bases ATGCCGAGTGCCGTTTCGCGTTTTGCCAGGATCGCCGCCATTGCCGTACTGACGAGCGCTACCGTTTTTGCCACGATCAG CGATGCCGATGCGCGCCGCGCCGGCGGATTCGGTGGATTCGGAAGCCGCGGCACGCGGACCTTCAGCGCCCCACCGGTCA CTCGCACCGCACCTGCCCCGGCTGCGCCGATCGAACGCTCGATGACGCCACGCCCGCAGACGACCGCACCCTACAACACG CAGCAGCCCGGCTATGCCCAGCAGCGCCCTGGCTTCTTCAACGGCTTCGGCCGTTCGATGATCGGCGGCCTGATTGCCGG CGGCCTTCTCGGCATGCTGCTCGGTCACGGTTTCGGCGGTGGCTTCGGCTTCCTCGGCATGTTGCTGCAGATCGCCCTGA TCGGCGGCGCCATCATGCTGGCGATGCGTTATTTCGCCAACCGCCGCCAGCCTTCTTATGGCGCCGGCGGCCAGAGCCGG TCCTATAGCATGTCGCCCACCAACAATGCGTCCTTCCAGATTCCGGCGATCGGTTCGGGCGCCGGTTTCGGCGGGCAGTC GCGCGGCAACCGGCCGAGCGATGAGATCGGGCTGGCCCAGGCCGACCTCGACCAGTTCGAGGAATTGCTGACCAACGTTC AGACCGCTTACGGAGCCGAGGATTACGGCACACTGCGCCGACTGACGACGCCCGAGGCAATGTCCTATCTTGCCGAGGAG CTCGGCGAAAACGCCACCAACGGCGTGCGCAACCGCGTCTCCGACGTCAAGCTGCTGCAGGGCGATATCGCCGAAGCCTG GCGCGAGGACGGCCAGGAATATGCGACGCTCGCCATGCGCTATTCCTCAATCGACGCCATGGTCGAGCGCGACAGTGGCC GTGTCGTTTCCGGCGACGACCGCCGTCCGAGCGAGAGCACCGAGATATGGACGTTCGTGCGCAAGCCCGGCGGGGACTGG AAGCTTGCCGCAATCCAGGGAACCGGGCAGCGCGCCGCTTAA
Upstream 100 bases:
>100_bases CGATGTCTGCCAGTAAAGCGGCCGAGAACTTCAAACGGCGGAAACAGTACCTATATTCTATCCCGACATGCCGTGATTGT GCATGACAGGAGACCAAGAA
Downstream 100 bases:
>100_bases CGAAAGCCAACGAAAGCACTTGTGATGCCGCCCAAGCTGCTGGTCAGCTCGGGCGGCGTTTTAGTTGACCGCGACCGGCT TGGAGCGCATGCGGGAAACG
Product: putative import inner membrane translocase, TIM family
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family; Lipoprotein
Number of amino acids: Translated: 333; Mature: 332
Protein sequence:
>333_residues MPSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAPAAPIERSMTPRPQTTAPYNT QQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGGGFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSR SYSMSPTNNASFQIPAIGSGAGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDDRRPSESTEIWTFVRKPGGDW KLAAIQGTGQRAA
Sequences:
>Translated_333_residues MPSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAPAAPIERSMTPRPQTTAPYNT QQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGGGFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSR SYSMSPTNNASFQIPAIGSGAGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDDRRPSESTEIWTFVRKPGGDW KLAAIQGTGQRAA >Mature_332_residues PSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAPAAPIERSMTPRPQTTAPYNTQ QPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGGGFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSRS YSMSPTNNASFQIPAIGSGAGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEEL GENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDDRRPSESTEIWTFVRKPGGDWK LAAIQGTGQRAA
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35287; Mature: 35156
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAP CCHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC AAPIERSMTPRPQTTAPYNTQQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGG CCCHHCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSRSYSMSPTNNASFQIPAIGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC AGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDD HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCC RRPSESTEIWTFVRKPGGDWKLAAIQGTGQRAA CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC >Mature Secondary Structure PSAVSRFARIAAIAVLTSATVFATISDADARRAGGFGGFGSRGTRTFSAPPVTRTAPAP CHHHHHHHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCCCCCCEECCCCCCCCCCCCC AAPIERSMTPRPQTTAPYNTQQPGYAQQRPGFFNGFGRSMIGGLIAGGLLGMLLGHGFGG CCCHHCCCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC GFGFLGMLLQIALIGGAIMLAMRYFANRRQPSYGAGGQSRSYSMSPTNNASFQIPAIGSG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC AGFGGQSRGNRPSDEIGLAQADLDQFEELLTNVQTAYGAEDYGTLRRLTTPEAMSYLAEE CCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHH LGENATNGVRNRVSDVKLLQGDIAEAWREDGQEYATLAMRYSSIDAMVERDSGRVVSGDD HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEECCCC RRPSESTEIWTFVRKPGGDWKLAAIQGTGQRAA CCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA