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The map label for this gene is hupE [H]

Identifier: 190894517

GI number: 190894517

Start: 180482

End: 181081

Strand: Reverse

Name: hupE [H]

Synonym: RHECIAT_PC0000179

Alternate gene names: 190894517

Gene position: 181081-180482 (Counterclockwise)

Preceding gene: 190894518

Following gene: 190894516

Centisome position: 16.59

GC content: 63.83

Gene sequence:

>600_bases
ATGAAATCAGCACTGAAGAGCGGCCTGCTTGCCTTGGCTGCCGTGGCGCTTCCGGCTGTCGCTTCCGCCCATCCCGCCGT
TGGCGAAGCTGCCGGCTTTACTCATGGCTTTGCTCATCCGCTGTCCGGTCTCGATCATGTCCTCGCCATGGTGATGGTCG
GCGTTTTGGCTTTCCAGCTTGGCGGCCGCGCTCTCTGGCTCCTGCCGGCAACCTTCGTCATGGTGATGGCGTTTGGCGGC
GCTCTCGGTGTTGCCGGCGTCAATGTTCCCTTTGTTGAAACCGGCATCGCGTTTTCCGTCATCGTTCTTGGGGCCGTCGT
TGCGCTGAACGTCAAGGCGCCGCTCGCCGCAGCGCTCGGCATGGTCGGTTTCTTCGCCATCTTTCATGGCCATGCGCATG
GCGCCGAAATGCCGGAAGATGCGGCCGGCGCTGCCTATGCTGCCGGCTTCATGATCGCGACGGGGCTGCTGCATATCGCC
GGCCTCGCCCTCGGTTACGTCATCGGTCGCGCCGGCGAAAACCGAAGCGTTGTGGTGACGCGGATGGCGGGCGGCGTTGC
CGCGATTTCAGGCCTCGGCATCCTGGCCGGCTTGATCTGA

Upstream 100 bases:

>100_bases
GACGCCGCGAATTTCTTGACTTAGCTTGCTGCGCACGACTTGGAACTCGGCGGTCGTCGGCGACCGCAGGATTTTTGGAA
AAAACGCGAGGAAATCGACA

Downstream 100 bases:

>100_bases
GCTGGCTGATCGCTGAAATGAAAGCGGGTGCGCGTCTGGATGCACCCTTGATAGACGAGGACGCCCGGCGCCTATTGCCG
GGCTTTTTTGCGTCGTTCTC

Product: putative hydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKSALKSGLLALAAVALPAVASAHPAVGEAAGFTHGFAHPLSGLDHVLAMVMVGVLAFQLGGRALWLLPATFVMVMAFGG
ALGVAGVNVPFVETGIAFSVIVLGAVVALNVKAPLAAALGMVGFFAIFHGHAHGAEMPEDAAGAAYAAGFMIATGLLHIA
GLALGYVIGRAGENRSVVVTRMAGGVAAISGLGILAGLI

Sequences:

>Translated_199_residues
MKSALKSGLLALAAVALPAVASAHPAVGEAAGFTHGFAHPLSGLDHVLAMVMVGVLAFQLGGRALWLLPATFVMVMAFGG
ALGVAGVNVPFVETGIAFSVIVLGAVVALNVKAPLAAALGMVGFFAIFHGHAHGAEMPEDAAGAAYAAGFMIATGLLHIA
GLALGYVIGRAGENRSVVVTRMAGGVAAISGLGILAGLI
>Mature_199_residues
MKSALKSGLLALAAVALPAVASAHPAVGEAAGFTHGFAHPLSGLDHVLAMVMVGVLAFQLGGRALWLLPATFVMVMAFGG
ALGVAGVNVPFVETGIAFSVIVLGAVVALNVKAPLAAALGMVGFFAIFHGHAHGAEMPEDAAGAAYAAGFMIATGLLHIA
GLALGYVIGRAGENRSVVVTRMAGGVAAISGLGILAGLI

Specific function: Needed for full hydrogenase activity [H]

COG id: COG2370

COG function: function code O; Hydrogenase/urease accessory protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007038 [H]

Pfam domain/function: PF04955 HupE_UreJ [H]

EC number: NA

Molecular weight: Translated: 19573; Mature: 19573

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS00626 RCC1_2 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSALKSGLLALAAVALPAVASAHPAVGEAAGFTHGFAHPLSGLDHVLAMVMVGVLAFQL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GGRALWLLPATFVMVMAFGGALGVAGVNVPFVETGIAFSVIVLGAVVALNVKAPLAAALG
CCCEEHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MVGFFAIFHGHAHGAEMPEDAAGAAYAAGFMIATGLLHIAGLALGYVIGRAGENRSVVVT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
RMAGGVAAISGLGILAGLI
ECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSALKSGLLALAAVALPAVASAHPAVGEAAGFTHGFAHPLSGLDHVLAMVMVGVLAFQL
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GGRALWLLPATFVMVMAFGGALGVAGVNVPFVETGIAFSVIVLGAVVALNVKAPLAAALG
CCCEEHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
MVGFFAIFHGHAHGAEMPEDAAGAAYAAGFMIATGLLHIAGLALGYVIGRAGENRSVVVT
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEE
RMAGGVAAISGLGILAGLI
ECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597428 [H]