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The map label for this gene is ndiA

Identifier: 190894481

GI number: 190894481

Start: 138828

End: 139736

Strand: Reverse

Name: ndiA

Synonym: RHECIAT_PC0000143

Alternate gene names: NA

Gene position: 139736-138828 (Counterclockwise)

Preceding gene: 190894482

Following gene: 190894479

Centisome position: 12.8

GC content: 60.84

Gene sequence:

>909_bases
ATGTCGCCGGGCCAACTGGTGGACGAGGTTATTGCTTACGCCAAGAACAGCGGAGGCGGTGAGTTCGTCGGGAACCTCGG
CCGCGCGCTGAAGGATAATCCGCTTCCGGTGGCGCTGATGGGCGTCAGTCTCGCTTGGCTGATGGTCAAAGGCAACCCTG
CGTCAGCGATTGGATCAACGACGTCAGTCGAGCCGGAATATGACCTCTACCCCGTTCAGGGGCCGGTGCGCCGCCTTGGG
CCGCCGACCTCTGTCGAGGGCGTCCGCTACAGCCATTTTTCGGATAGCACCGGCAGGACACTGAAGGCCGTAACTGACGA
AACCGGACGCCGGGCGGGTCATTTTGTCGATGAAAGTGGCAAGGCCTATCGCGGTTTCGTCGATGCCAGCGGCAAGCGGG
TCGACCAGATTGTCGACGAGACGGGAGCTATGCTGGACGCTGCATCCGGTTGGGCCGCCGAAAAGTGGGAGCAAGCAAAG
ACTGCTGTGCAAGGCGCTTCCGACCGCGCGACTGGGACGGCGAATGCACTCGCCGACCAGGCCTCTTCTGCTGTGACGAA
CCTGCATGAACAGACAAACCGGCTCAATTCAATGATCCTCCACCAGTTTCGCGATCAGCCGCTGGTCGGCGGCGCATTGG
CTTTTGCGGTCGGAGCCGCGATCGGCGCAGCGCTTCCGAGCACCGAAATTGAAGATGAACTGGCCGGCGAAGTTTCGGAT
GCTACCAAGGAAGCGATAAGCGCAGAGACTTCTGAACTTGTCGACCAAGGCGCCGCTATCGCTTCAAACGCCTACCAACG
CGTGGTCACGGTCGCATCGGACGCTCACGACGACATCAAGGATCGCCTTTCTGAAGAGGTCGAGTCCCTACGCAAGCCAG
GAGCCCGAGATCCCATGGTATCCGGCTGA

Upstream 100 bases:

>100_bases
GATGGAAACGTCTTCAGACAAAACGTCGCTGGAGCTTCAGCGAGAAATCGATCAAGATCGCCAGCGTCTTGGGGAACGGA
TCAACGCGATCCAGGAGCGA

Downstream 100 bases:

>100_bases
CCCGCAAACCGGGACCCTGGCCGGAGTTCGGCAGCCGGATCGAGCGGTCCGCCAACGGCGAGACGATTCTGCCCGTCATC
ATCTGTCCAGCCCAAGGCCT

Product: nutrient deprivation-induced protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 301

Protein sequence:

>302_residues
MSPGQLVDEVIAYAKNSGGGEFVGNLGRALKDNPLPVALMGVSLAWLMVKGNPASAIGSTTSVEPEYDLYPVQGPVRRLG
PPTSVEGVRYSHFSDSTGRTLKAVTDETGRRAGHFVDESGKAYRGFVDASGKRVDQIVDETGAMLDAASGWAAEKWEQAK
TAVQGASDRATGTANALADQASSAVTNLHEQTNRLNSMILHQFRDQPLVGGALAFAVGAAIGAALPSTEIEDELAGEVSD
ATKEAISAETSELVDQGAAIASNAYQRVVTVASDAHDDIKDRLSEEVESLRKPGARDPMVSG

Sequences:

>Translated_302_residues
MSPGQLVDEVIAYAKNSGGGEFVGNLGRALKDNPLPVALMGVSLAWLMVKGNPASAIGSTTSVEPEYDLYPVQGPVRRLG
PPTSVEGVRYSHFSDSTGRTLKAVTDETGRRAGHFVDESGKAYRGFVDASGKRVDQIVDETGAMLDAASGWAAEKWEQAK
TAVQGASDRATGTANALADQASSAVTNLHEQTNRLNSMILHQFRDQPLVGGALAFAVGAAIGAALPSTEIEDELAGEVSD
ATKEAISAETSELVDQGAAIASNAYQRVVTVASDAHDDIKDRLSEEVESLRKPGARDPMVSG
>Mature_301_residues
SPGQLVDEVIAYAKNSGGGEFVGNLGRALKDNPLPVALMGVSLAWLMVKGNPASAIGSTTSVEPEYDLYPVQGPVRRLGP
PTSVEGVRYSHFSDSTGRTLKAVTDETGRRAGHFVDESGKAYRGFVDASGKRVDQIVDETGAMLDAASGWAAEKWEQAKT
AVQGASDRATGTANALADQASSAVTNLHEQTNRLNSMILHQFRDQPLVGGALAFAVGAAIGAALPSTEIEDELAGEVSDA
TKEAISAETSELVDQGAAIASNAYQRVVTVASDAHDDIKDRLSEEVESLRKPGARDPMVSG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31583; Mature: 31452

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGQLVDEVIAYAKNSGGGEFVGNLGRALKDNPLPVALMGVSLAWLMVKGNPASAIGST
CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHEEEEEEEECCCHHHCCCC
TSVEPEYDLYPVQGPVRRLGPPTSVEGVRYSHFSDSTGRTLKAVTDETGRRAGHFVDESG
CCCCCCCCEECCCCHHHHCCCCCCCCCCEECCCCCCCCCEEHHHHHHHCHHHCCCCCCCC
KAYRGFVDASGKRVDQIVDETGAMLDAASGWAAEKWEQAKTAVQGASDRATGTANALADQ
CCEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ASSAVTNLHEQTNRLNSMILHQFRDQPLVGGALAFAVGAAIGAALPSTEIEDELAGEVSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATKEAISAETSELVDQGAAIASNAYQRVVTVASDAHDDIKDRLSEEVESLRKPGARDPMV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
SG
CC
>Mature Secondary Structure 
SPGQLVDEVIAYAKNSGGGEFVGNLGRALKDNPLPVALMGVSLAWLMVKGNPASAIGST
CHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHEEEEEEEECCCHHHCCCC
TSVEPEYDLYPVQGPVRRLGPPTSVEGVRYSHFSDSTGRTLKAVTDETGRRAGHFVDESG
CCCCCCCCEECCCCHHHHCCCCCCCCCCEECCCCCCCCCEEHHHHHHHCHHHCCCCCCCC
KAYRGFVDASGKRVDQIVDETGAMLDAASGWAAEKWEQAKTAVQGASDRATGTANALADQ
CCEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
ASSAVTNLHEQTNRLNSMILHQFRDQPLVGGALAFAVGAAIGAALPSTEIEDELAGEVSD
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
ATKEAISAETSELVDQGAAIASNAYQRVVTVASDAHDDIKDRLSEEVESLRKPGARDPMV
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
SG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA