| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894473
Identifier: 190894473
GI number: 190894473
Start: 133426
End: 133719
Strand: Reverse
Name: 190894473
Synonym: RHECIAT_PC0000135
Alternate gene names: NA
Gene position: 133719-133426 (Counterclockwise)
Preceding gene: 190894474
Following gene: 190894471
Centisome position: 12.25
GC content: 57.14
Gene sequence:
>294_bases ATGAGCTATCTGGTCAAGGTGCTTCTCCCCGTTGGGAACGATGCCGGTTCTATCCTGGAGCCGATCAGCCACAAATTGAC CGAAACCTTCGGCGGCGTCACGATGCATGTCAACGCCCCTGCGGAGGGTCTCTGGAAAAACGAAGGCGACGTCGATTGGG ACAGGATTGTCGTCGTTGAAGTGATGACCAACAATCTTGATCGGGCGTGGTGGGCGGCTTTTCGGAAGGAGCTGGAACTC GCGCTCGAGCAGGAAGAGATCGTGATCAGGGCGAGCGAAGTTGAGCGCCTCTAG
Upstream 100 bases:
>100_bases AAACAATCTTGGCGCCGTCGACGGGGAGGAGAAGAGAGACCTGGCAAGGCAGCTCGCACGTCCGAAGCATGGCACCGCAT GACCCTTTGCGAGGCGCTTC
Downstream 100 bases:
>100_bases CGCGGTCGCCGCGGAATCGGCCGAGACTGCCTCAGCCTGATTCCTACGCTGCTCCTCGAGCCATCTCCGGTGTACTTCGA GGGCGGCCGTTTGATTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 97; Mature: 96
Protein sequence:
>97_residues MSYLVKVLLPVGNDAGSILEPISHKLTETFGGVTMHVNAPAEGLWKNEGDVDWDRIVVVEVMTNNLDRAWWAAFRKELEL ALEQEEIVIRASEVERL
Sequences:
>Translated_97_residues MSYLVKVLLPVGNDAGSILEPISHKLTETFGGVTMHVNAPAEGLWKNEGDVDWDRIVVVEVMTNNLDRAWWAAFRKELEL ALEQEEIVIRASEVERL >Mature_96_residues SYLVKVLLPVGNDAGSILEPISHKLTETFGGVTMHVNAPAEGLWKNEGDVDWDRIVVVEVMTNNLDRAWWAAFRKELELA LEQEEIVIRASEVERL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10961; Mature: 10829
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYLVKVLLPVGNDAGSILEPISHKLTETFGGVTMHVNAPAEGLWKNEGDVDWDRIVVVE CCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHEEEEE VMTNNLDRAWWAAFRKELELALEQEEIVIRASEVERL EECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC >Mature Secondary Structure SYLVKVLLPVGNDAGSILEPISHKLTETFGGVTMHVNAPAEGLWKNEGDVDWDRIVVVE CCEEEEEEECCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCHHHEEEEE VMTNNLDRAWWAAFRKELELALEQEEIVIRASEVERL EECCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA