| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is tauC [C]
Identifier: 190894435
GI number: 190894435
Start: 92747
End: 93583
Strand: Reverse
Name: tauC [C]
Synonym: RHECIAT_PC0000097
Alternate gene names: 190894435
Gene position: 93583-92747 (Counterclockwise)
Preceding gene: 190894436
Following gene: 190894434
Centisome position: 8.57
GC content: 63.2
Gene sequence:
>837_bases ATGAGTGACGAGACCGACTCATCGCCCCATCCGGACGCCGCCGGCGCCAAGCGCCGCGATCTTGCGTTGCGCATCGCCGT TCCCATGCTCGTCATCGCCCTCCTGGTGCTGATCTGGTACGCCTATGTGAAACTGTCAGGGGTGCCGTCCTATATCCTGC CGGGTCCGGCGGCTGTGGCGAACGCCTTCGTGACCGACTGGGCCACGCTTGCGCCCGCATTCTGGGTCACGACGAAAATC ACCTTCCTGTCGCTGATGCTGGCGCTTGTCGGCGGCGTCGGCTTTGCGATCTTCCTCGTGCAGTCGCGCTGGATCGAACT CGCTTTCTATCCGCTCGCGGTCATTCTGCAGGTAACGCCGATCGTCGCGATCTCGCCGCTGATCCTGATCTATGCGCCCT CGACGCAGGTGGCGCTGCTGATCTGCGCCTTCCTCGTCGCCTTCTTTCCGATCCTGTCGAACATGGTCCAGGGGCTGAAG AGCGTCGACCACAATCTCATCAACCTCTTCGAACTCTACGGCGCCTCCCGCTGGCAGACACTGCTCTATCTCAAGCTGCC CGCCGCCCAGCCCTATTTCATGACAGGCCTCCGGATCGGCGGCGGCCTGGCGCTGATTGCCGCCGTCGTCGCGGAATTTG CGGCAGGATCGGCGGGTGCGGGATCCGGGCTCGCCTTCCGGCTTCTCGAAGCTCAGTACCGGCTCAACATCCCCCGCCTC TTCGCCGCGCTGCTGATGCTTTCGCTTCTCGGCGTCGCGATCTTTGCCGTCACCTCGTTCATTTCCTGGCTTGCCCTGCA CCGCTGGCATGAGAGCAGCCTGAAACGGGAAAACTGA
Upstream 100 bases:
>100_bases AGCGCGATGCCTATTACCGCAGTTCCGAAGAATACAGGAAGGCCTGCGAGACGGTCTCCCATTCGCTCATCGGCGCAATC AATTCGGCGGGAGATCATTG
Downstream 100 bases:
>100_bases TGACCTATCCCTTCATCTCCCCGCCCAATGCCGGGCCGCTTCGCACTGTGCAACGCGACGCTTCCCGCCGCCGCCACCGT CGGATTTGACGCGCCTGCCG
Product: putative nitrate/sulfonate/bicarbonate ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSDETDSSPHPDAAGAKRRDLALRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFWVTTKI TFLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLK SVDHNLINLFELYGASRWQTLLYLKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRLNIPRL FAALLMLSLLGVAIFAVTSFISWLALHRWHESSLKREN
Sequences:
>Translated_278_residues MSDETDSSPHPDAAGAKRRDLALRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFWVTTKI TFLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLK SVDHNLINLFELYGASRWQTLLYLKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRLNIPRL FAALLMLSLLGVAIFAVTSFISWLALHRWHESSLKREN >Mature_277_residues SDETDSSPHPDAAGAKRRDLALRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVANAFVTDWATLAPAFWVTTKIT FLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTPIVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLKS VDHNLINLFELYGASRWQTLLYLKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRLNIPRLF AALLMLSLLGVAIFAVTSFISWLALHRWHESSLKREN
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=215, Percent_Identity=27.4418604651163, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI87081802, Length=235, Percent_Identity=25.9574468085106, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30117; Mature: 29986
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDETDSSPHPDAAGAKRRDLALRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NAFVTDWATLAPAFWVTTKITFLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQT HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE LLYLKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRLNIPRL EEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHH FAALLMLSLLGVAIFAVTSFISWLALHRWHESSLKREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SDETDSSPHPDAAGAKRRDLALRIAVPMLVIALLVLIWYAYVKLSGVPSYILPGPAAVA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH NAFVTDWATLAPAFWVTTKITFLSLMLALVGGVGFAIFLVQSRWIELAFYPLAVILQVTP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVAISPLILIYAPSTQVALLICAFLVAFFPILSNMVQGLKSVDHNLINLFELYGASRWQT HHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHE LLYLKLPAAQPYFMTGLRIGGGLALIAAVVAEFAAGSAGAGSGLAFRLLEAQYRLNIPRL EEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHH FAALLMLSLLGVAIFAVTSFISWLALHRWHESSLKREN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]