| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894410
Identifier: 190894410
GI number: 190894410
Start: 68598
End: 69095
Strand: Reverse
Name: 190894410
Synonym: RHECIAT_PC0000072
Alternate gene names: NA
Gene position: 69095-68598 (Counterclockwise)
Preceding gene: 190894411
Following gene: 190894409
Centisome position: 6.33
GC content: 59.44
Gene sequence:
>498_bases ATGATTTACTTCACCGGCGATACCCACTTTGCAGATCCACGCGTCCTACGCATCGACCGACGCCCCTTCCCCGACATGGC CTCGCATGACGTGACGCTGATCCGGAACTGGAACGACATCGTTGGTCCGCAGGACGACATCTGGCACCTCGGCGACGTCA TGTCCTCTCGTGGCGGGGATTGTGATCAGCTGCTTTCGATGCTGAACGGGCGCAAGCACCTGATTATCGGAAATAATGAT CCGCCGACGACGACGGAGGCGAAAGGCTGGGCAAGCGTTCAGCACTACAAGGAGATGACGCTGGACGACCATCTGCTGGT CCTCTGCCACTACCCGTTCCGCACCTGGAACAAGATGGGCAAGAAATCGATCAATCTGCACGGACATTCGCATGGCCGTC TGAAGACCCTGCCCCGCCAGTACGATGTCGGCGTCGATGCGCAGGGCCTCAGGCCGGTGTCGCTGGACGCCTTGTTGTCG ACGAAGCGCGGACTATGA
Upstream 100 bases:
>100_bases GCAGCCCGTCGCTTGCCGATGTCAAACATTCGATCCCGACAGCCGGCCATTAGCAAAAACGCCGACTTTCCAACCAAGCG AGCTGCGCCATGTCTGTCAG
Downstream 100 bases:
>100_bases TGCGGCTCGCATCGAGCACGTTCGACGTCTGTGGAACCGTGCCCCGGTGCTTTCCTTGCCGAGGTGGCGGCCCATTTGCT TTATCGCGGGTGAGAGGTTC
Product: putative hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNDIVGPQDDIWHLGDVMSSRGGDCDQLLSMLNGRKHLIIGNND PPTTTEAKGWASVQHYKEMTLDDHLLVLCHYPFRTWNKMGKKSINLHGHSHGRLKTLPRQYDVGVDAQGLRPVSLDALLS TKRGL
Sequences:
>Translated_165_residues MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNDIVGPQDDIWHLGDVMSSRGGDCDQLLSMLNGRKHLIIGNND PPTTTEAKGWASVQHYKEMTLDDHLLVLCHYPFRTWNKMGKKSINLHGHSHGRLKTLPRQYDVGVDAQGLRPVSLDALLS TKRGL >Mature_165_residues MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNDIVGPQDDIWHLGDVMSSRGGDCDQLLSMLNGRKHLIIGNND PPTTTEAKGWASVQHYKEMTLDDHLLVLCHYPFRTWNKMGKKSINLHGHSHGRLKTLPRQYDVGVDAQGLRPVSLDALLS TKRGL
Specific function: Unknown
COG id: COG4186
COG function: function code R; Predicted phosphoesterase or phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 18765; Mature: 18765
Theoretical pI: Translated: 8.28; Mature: 8.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNDIVGPQDDIWHLGDVMSSRGGD CEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHCCCCC CDQLLSMLNGRKHLIIGNNDPPTTTEAKGWASVQHYKEMTLDDHLLVLCHYPFRTWNKMG HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHC KKSINLHGHSHGRLKTLPRQYDVGVDAQGLRPVSLDALLSTKRGL CEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC >Mature Secondary Structure MIYFTGDTHFADPRVLRIDRRPFPDMASHDVTLIRNWNDIVGPQDDIWHLGDVMSSRGGD CEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHCCCCC CDQLLSMLNGRKHLIIGNNDPPTTTEAKGWASVQHYKEMTLDDHLLVLCHYPFRTWNKMG HHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCHHHHHHHC KKSINLHGHSHGRLKTLPRQYDVGVDAQGLRPVSLDALLSTKRGL CEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]