| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894370
Identifier: 190894370
GI number: 190894370
Start: 32445
End: 33479
Strand: Reverse
Name: 190894370
Synonym: RHECIAT_PC0000030
Alternate gene names: NA
Gene position: 33479-32445 (Counterclockwise)
Preceding gene: 190894378
Following gene: 190894369
Centisome position: 3.07
GC content: 65.31
Gene sequence:
>1035_bases ATGTTCGGACTGCGCTTCATCAAGACGGAACCTACGCAATACGTCATCCAATATCAAAACGGCACCGCCGTCCGCGAAGG TGCGGGCCTGGCCTTCTGGCATTTCGCGCCATCGAGCTCGCTGGTCCTGGTGCCGACGGCGAGCGTCAACGACCCCTTCA TCTTTCCGCTGGTGACGTCGGACTTCCAGGAAGTGACCGTGCAGGGGCAGATCACCTACCGCATCGCCGAGCCGCGCCGC ACGGCAGCCCTCCTGAATTTCACGCTCGACCGCAAGGGCCGTTATGTCTCGGAAGATCCGCAGAAGCTTTCGACCCGGGT GATCGACCGCGTGCAGGTGGCGATGCGTGCCGAGGTGCAGATGCTGTCGCTCAAGGAGGTTCTTGCCTCGGGCGAGGCGC TGGTCGCCGGCGTGGCGGAAGCGCTCAGGGTACACCCGACGATCGAAGCGCTCGGCCTCGAAATCCTCGGCCTGTCGCTG CTCGCCGTCATGCCGAAGGCCGAGACGGCCAAGGCGCTGGAAGCGCAGGCCCGCGAGGCCCTGCTCCGCCAGGCCGACGA GGCCATCTACAGCAGGCGCAATGCCGCCATCGAACAGGAGCGGACGATCAAGGAAAACGAGATCGCCACCGAGATCACGC TGGAGAACAAGAGGCGGCAGGTGCGCGAGGCGCAGATGGAAGCCGAGCGCGCCGTGCAGGAACGGCAGCTGCAGATCCGG CGGGAGGAGATGGCCGGCAAAATCGCGCTGGAGGAGCAGAACCGCGATCTGGTGACGCTTGCCGCGACCAACGCCAAGGC CGAGGCCGACGCGCAGGCCTATGCGCTGACGGCGATGATGAAATCCTTCGAGCAGGCCGATCCGAAAGTGCTGCAGGCGC TCGCCTCGGTCGGCATGAAGCCCGGCCAGCTGATGGCGCTCGCCTTCCGCGACCTTGCCGACAATGCCACGAAGATCGGC CAGCTCAACGTTTCGCCCGATCTTCTGCGCGAGATATTGCAGCCGCAGGAGGGCAAGGACCGTGCCGGCCTCTGA
Upstream 100 bases:
>100_bases GTGTAAATCTTCAACTAAGTTAGTTGACATTTATCACTAAGTCATGTTTTCTCCATTTCGACACGAGCAGGGGGCTCGTG CCAGGAACAAGGAAACGGTC
Downstream 100 bases:
>100_bases CGAACGCAAGATCATCCTGGTCGTCCGCCCGACCCGCCTCGACGAACTCATCGCCCGGTTCAACACGGTGCAGCAGGCGC AATTCTATGTCGAACATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: SPFH Domain-Containing Protein/Band 7 Family Protein
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MFGLRFIKTEPTQYVIQYQNGTAVREGAGLAFWHFAPSSSLVLVPTASVNDPFIFPLVTSDFQEVTVQGQITYRIAEPRR TAALLNFTLDRKGRYVSEDPQKLSTRVIDRVQVAMRAEVQMLSLKEVLASGEALVAGVAEALRVHPTIEALGLEILGLSL LAVMPKAETAKALEAQAREALLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR REEMAGKIALEEQNRDLVTLAATNAKAEADAQAYALTAMMKSFEQADPKVLQALASVGMKPGQLMALAFRDLADNATKIG QLNVSPDLLREILQPQEGKDRAGL
Sequences:
>Translated_344_residues MFGLRFIKTEPTQYVIQYQNGTAVREGAGLAFWHFAPSSSLVLVPTASVNDPFIFPLVTSDFQEVTVQGQITYRIAEPRR TAALLNFTLDRKGRYVSEDPQKLSTRVIDRVQVAMRAEVQMLSLKEVLASGEALVAGVAEALRVHPTIEALGLEILGLSL LAVMPKAETAKALEAQAREALLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR REEMAGKIALEEQNRDLVTLAATNAKAEADAQAYALTAMMKSFEQADPKVLQALASVGMKPGQLMALAFRDLADNATKIG QLNVSPDLLREILQPQEGKDRAGL >Mature_344_residues MFGLRFIKTEPTQYVIQYQNGTAVREGAGLAFWHFAPSSSLVLVPTASVNDPFIFPLVTSDFQEVTVQGQITYRIAEPRR TAALLNFTLDRKGRYVSEDPQKLSTRVIDRVQVAMRAEVQMLSLKEVLASGEALVAGVAEALRVHPTIEALGLEILGLSL LAVMPKAETAKALEAQAREALLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR REEMAGKIALEEQNRDLVTLAATNAKAEADAQAYALTAMMKSFEQADPKVLQALASVGMKPGQLMALAFRDLADNATKIG QLNVSPDLLREILQPQEGKDRAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38068; Mature: 38068
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFGLRFIKTEPTQYVIQYQNGTAVREGAGLAFWHFAPSSSLVLVPTASVNDPFIFPLVTS CCCCEEEECCCCEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECC DFQEVTVQGQITYRIAEPRRTAALLNFTLDRKGRYVSEDPQKLSTRVIDRVQVAMRAEVQ CCHHEEEEEEEEEEECCCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MLSLKEVLASGEALVAGVAEALRVHPTIEALGLEILGLSLLAVMPKAETAKALEAQAREA HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH REEMAGKIALEEQNRDLVTLAATNAKAEADAQAYALTAMMKSFEQADPKVLQALASVGMK HHHHCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC PGQLMALAFRDLADNATKIGQLNVSPDLLREILQPQEGKDRAGL CCHHHHHHHHHHHCCCHHCEEECCCHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MFGLRFIKTEPTQYVIQYQNGTAVREGAGLAFWHFAPSSSLVLVPTASVNDPFIFPLVTS CCCCEEEECCCCEEEEEECCCCEEECCCCEEEEEECCCCCEEEEEECCCCCCEEEEEECC DFQEVTVQGQITYRIAEPRRTAALLNFTLDRKGRYVSEDPQKLSTRVIDRVQVAMRAEVQ CCHHEEEEEEEEEEECCCCHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MLSLKEVLASGEALVAGVAEALRVHPTIEALGLEILGLSLLAVMPKAETAKALEAQAREA HHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LLRQADEAIYSRRNAAIEQERTIKENEIATEITLENKRRQVREAQMEAERAVQERQLQIR HHHHHHHHHHHHHHHHHHHHHCCHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH REEMAGKIALEEQNRDLVTLAATNAKAEADAQAYALTAMMKSFEQADPKVLQALASVGMK HHHHCCEEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC PGQLMALAFRDLADNATKIGQLNVSPDLLREILQPQEGKDRAGL CCHHHHHHHHHHHCCCHHCEEECCCHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA