| Definition | Rhizobium etli CIAT 652 plasmid pC, complete sequence. |
|---|---|
| Accession | NC_010997 |
| Length | 1,091,523 |
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The map label for this gene is 190894348
Identifier: 190894348
GI number: 190894348
Start: 9138
End: 9611
Strand: Reverse
Name: 190894348
Synonym: RHECIAT_PC0000008
Alternate gene names: NA
Gene position: 9611-9138 (Counterclockwise)
Preceding gene: 190894350
Following gene: 190894346
Centisome position: 0.88
GC content: 60.34
Gene sequence:
>474_bases ATGCGAGGTCGGTCATGGCTAGAAGTTCGCGGCTGGCGGGCATGGTCAGGACGATCGGGCGGTGGTGCGCTGGGTGCTTC AGCGCGGGAGAGAATGCCTGACCTCTCGTCCGTCATACTCGGGCTTGTCCCGAGTATCTGCCTCCGGTCGATAGGGCAGC AGATCCTCGGCACAAGGCCGAGGACGACGCCGAGTAAAAATGAAACGGCTGCGGAAAATTGGCCGGAGGCCAACCCCACA CTCCTCACGAAATCAGGTCATGTGGACATAGGCACCACCTCTCCGCCGTCATTCCTGTGCTCGTCACAGGAATCCAGCCA CTGCGCGGTGAATGACTTACTGCCAGGCAAAGGAGTCTTCTGCGCCCAAGCACTCTTGGGCGCGCTGGATCCCTGTGACA TCCCTCGGGTGAAGCCTGAGGCTACAGGGATGACGGCGGAGAGATGCCCATATCCACCTGATCTGACTTGGTGA
Upstream 100 bases:
>100_bases TCGTCGCCAATCCAATGCCCGAGGCAGCGCCGGTGATGGCGGCGATTTTACCCTGCAAACCGTCCATATCCACTCCTCCA CTGTGTCGACCATCTATCGC
Downstream 100 bases:
>100_bases GACAGGAGAATGAACACCTTGAGCAATACAAGGGATCCCATACAGCCAAAAAAACGGGCGCGGCCGAAACCGCGCCCGGG CAAAATAAGCTCAAACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRPRTTPSKNETAAENWPEANPT LLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVFCAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW
Sequences:
>Translated_157_residues MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRPRTTPSKNETAAENWPEANPT LLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVFCAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW >Mature_157_residues MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRPRTTPSKNETAAENWPEANPT LLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVFCAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16755; Mature: 16755
Theoretical pI: Translated: 8.12; Mature: 8.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRP CCCCCCEEECCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RTTPSKNETAAENWPEANPTLLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVF CCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCHHHEECCCCCCCCCHHHCCCCCCHH CAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW HHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC >Mature Secondary Structure MRGRSWLEVRGWRAWSGRSGGGALGASARERMPDLSSVILGLVPSICLRSIGQQILGTRP CCCCCCEEECCEECCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCC RTTPSKNETAAENWPEANPTLLTKSGHVDIGTTSPPSFLCSSQESSHCAVNDLLPGKGVF CCCCCCCCCCCCCCCCCCCEEEECCCCEECCCCCCHHHEECCCCCCCCCHHHCCCCCCHH CAQALLGALDPCDIPRVKPEATGMTAERCPYPPDLTW HHHHHHHCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA