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The map label for this gene is trg [C]

Identifier: 190894341

GI number: 190894341

Start: 12

End: 1781

Strand: Reverse

Name: trg [C]

Synonym: RHECIAT_PC0000001

Alternate gene names: 190894341

Gene position: 1781-12 (Counterclockwise)

Preceding gene: 190894342

Following gene: NA

Centisome position: 0.16

GC content: 65.25

Gene sequence:

>1770_bases
ATGGTGGCGACAATCGTCGTCGGCTTCGGCAGCGCCCTCCTGATCGGCAACCAGGCTATCACCGGCCAGGCCCGGGTCGC
CGCTGTGGTGCAGGAGGCTGTGAACGCCAAGTTGGCGTCGGCCCATATCGAACAACAGTTCCGGCAGGCGACATCGGTGG
TCGACCGGGTACTATCGATGACGAATTTCGTGCCGGCAGCCGAGGTCAAGGCAGCGTTCGAGGAAAGAAATGGCGCACTC
TCGCAATCGCTCGATGAACTTGGGCGCGTTGATCTCGCCATGTCGCTGACCGAGGGGGTGCGCTCGCTTCGCGAGGCGCA
TGGCGCCTGGGAAGCGGACGTCAAGGTGAGCCTCGGCCTGCAGCAGGCAGGCCAAGTGCCGACGGCCGAGAAGCTGGCGC
GCTCGCAGCAGGCGATCATGACCGGCATCACAACCGTCAACAGTATCGTCGACAGGATCGCGACCGAAAGCGTCGCCGAA
GCGGGCAAGGCCCTGGAATCGAAGATCGAAGCCGAACTGGCGCTCGCGGGTCTTGCCGCCATCATCGGCCTCGGCATTCT
CATTGCCATCGCCCGGCATGTGTCGCGTCCGATCCAGCGCATCACCCGATCCATGCAGGAACTGGCCGCGGGCGAGACTG
ATAAGGCGATCCCCTATGCCGGGCGCGGCGACGAAATCGGGCTGATGGCGGGCTCCGTCGAAATCTTCCGCCAGAACGCC
ATCGCCCGGATCCGGCTGGAAAGCCAGGCCGAGGAAAACCGGCGTCTGGCCGAAGCAAACCGGCTGGCCGACCAGGAGCA
GGCGGAGCGCAGCGCTGCAGCACGGCTGAAGACTGCGACCTCGGGCCTCGCCGCCGGCCTGAAACGTCTCGCCGAGGGCG
ATCTCGCCTTCCAGCTCTCGGATCGGTTCGCGCCGGAATTCGAGCCGCTGCGGCACGACTTCAACGCATCGGTGGAGCAG
CTCGGCGGCACGCTGCTTTCGGTTTCAAAAAGCGTGTCGATCATCAATTCGGGCACTCGCGAGATCAACAACGGTTCCAG
CGAACTTTCCGGCCGTACCGAACGGCAGGCTGCGACGCTCGAGGAGACCGCCGCTGCGCTCGACGCCGTGACCGCCAAGG
TGAGCCAAGCCTTCAAGATCGCCGAAGAGGCGCGCAACGTTGCCGACAACGCCAATCGCAGCGCGATGGCATCCGGCAAG
GTGGTGGCTCAGACCGTCGACGCCATGGGTCAGATCGAGGAATCCTCCAAGCAGATCAACAATATCATCGGCGTCATCGA
CCAGATCGCCTTCCAGACCAATCTGCTGGCGCTCAACGCAGGCGTCGAAGCTGCACGCGCCGGCGAGGCCGGCAAGGGTT
TTGCCGTCGTCGCCCAGGAAGTGCGCGAGCTTGCCCAGCGTTCGGCCCAGGCCGCCCGGGAGATCAAGGAGCTGATCGGG
CGGGCATCCGCCAAGGTCGCGAGCGGCGTCGAGCTGGTCAACCACACCGGCGCGGCGCTTAGCGACATCGGCCGTTTCAT
CGTCGATATCAACCAGCGCATGGAAGCGCTCGCCGCCTCGGCGCGCGATCAGGCGACCAGCCTGTCGGAAGTCAATTCGG
CCATGGGCCAGCTCGACCAGGTAACCCAGCAGAACGCGGCCATGGTGGAGGAAACAACCGCCGCCAGCGTCACACTGGCC
AGCGAAGCCGAACGGCTGCGCGAACTGGTCACCCAGTTCGAATTGGGCGGGGCAGAGTCCGGCACGCGGAGCTATCGCGA
CGCAGCGTGA

Upstream 100 bases:

>100_bases
GGAACTCTGACCGCCGAGAAGCAGGACATTCCCCTGCCGACGTTGCCAAACTGAGGTGCATATCATGAGACTCTCCATAC
GCATGCAGATACTCTTCCCC

Downstream 100 bases:

>100_bases
GGTAAGCACGATTAGCTCCCGGCCCGGCCGACAGCCGGGATTTTTACACGCAGCAGGGCCATCAGCATCGAGCCGAGTGC
AAATTCACCCCGTTCGGCGC

Product: putative methyl accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MVATIVVGFGSALLIGNQAITGQARVAAVVQEAVNAKLASAHIEQQFRQATSVVDRVLSMTNFVPAAEVKAAFEERNGAL
SQSLDELGRVDLAMSLTEGVRSLREAHGAWEADVKVSLGLQQAGQVPTAEKLARSQQAIMTGITTVNSIVDRIATESVAE
AGKALESKIEAELALAGLAAIIGLGILIAIARHVSRPIQRITRSMQELAAGETDKAIPYAGRGDEIGLMAGSVEIFRQNA
IARIRLESQAEENRRLAEANRLADQEQAERSAAARLKTATSGLAAGLKRLAEGDLAFQLSDRFAPEFEPLRHDFNASVEQ
LGGTLLSVSKSVSIINSGTREINNGSSELSGRTERQAATLEETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGK
VVAQTVDAMGQIEESSKQINNIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAQAAREIKELIG
RASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSAMGQLDQVTQQNAAMVEETTAASVTLA
SEAERLRELVTQFELGGAESGTRSYRDAA

Sequences:

>Translated_589_residues
MVATIVVGFGSALLIGNQAITGQARVAAVVQEAVNAKLASAHIEQQFRQATSVVDRVLSMTNFVPAAEVKAAFEERNGAL
SQSLDELGRVDLAMSLTEGVRSLREAHGAWEADVKVSLGLQQAGQVPTAEKLARSQQAIMTGITTVNSIVDRIATESVAE
AGKALESKIEAELALAGLAAIIGLGILIAIARHVSRPIQRITRSMQELAAGETDKAIPYAGRGDEIGLMAGSVEIFRQNA
IARIRLESQAEENRRLAEANRLADQEQAERSAAARLKTATSGLAAGLKRLAEGDLAFQLSDRFAPEFEPLRHDFNASVEQ
LGGTLLSVSKSVSIINSGTREINNGSSELSGRTERQAATLEETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGK
VVAQTVDAMGQIEESSKQINNIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAQAAREIKELIG
RASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSAMGQLDQVTQQNAAMVEETTAASVTLA
SEAERLRELVTQFELGGAESGTRSYRDAA
>Mature_589_residues
MVATIVVGFGSALLIGNQAITGQARVAAVVQEAVNAKLASAHIEQQFRQATSVVDRVLSMTNFVPAAEVKAAFEERNGAL
SQSLDELGRVDLAMSLTEGVRSLREAHGAWEADVKVSLGLQQAGQVPTAEKLARSQQAIMTGITTVNSIVDRIATESVAE
AGKALESKIEAELALAGLAAIIGLGILIAIARHVSRPIQRITRSMQELAAGETDKAIPYAGRGDEIGLMAGSVEIFRQNA
IARIRLESQAEENRRLAEANRLADQEQAERSAAARLKTATSGLAAGLKRLAEGDLAFQLSDRFAPEFEPLRHDFNASVEQ
LGGTLLSVSKSVSIINSGTREINNGSSELSGRTERQAATLEETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGK
VVAQTVDAMGQIEESSKQINNIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAQAAREIKELIG
RASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSAMGQLDQVTQQNAAMVEETTAASVTLA
SEAERLRELVTQFELGGAESGTRSYRDAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=289, Percent_Identity=42.560553633218, Blast_Score=193, Evalue=3e-50,
Organism=Escherichia coli, GI1788194, Length=255, Percent_Identity=47.0588235294118, Blast_Score=191, Evalue=8e-50,
Organism=Escherichia coli, GI1788195, Length=303, Percent_Identity=42.5742574257426, Blast_Score=190, Evalue=2e-49,
Organism=Escherichia coli, GI2367378, Length=297, Percent_Identity=44.7811447811448, Blast_Score=181, Evalue=1e-46,
Organism=Escherichia coli, GI1789453, Length=244, Percent_Identity=38.5245901639344, Blast_Score=155, Evalue=9e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 62014; Mature: 62014

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVATIVVGFGSALLIGNQAITGQARVAAVVQEAVNAKLASAHIEQQFRQATSVVDRVLSM
CCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNFVPAAEVKAAFEERNGALSQSLDELGRVDLAMSLTEGVRSLREAHGAWEADVKVSLGL
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECH
QQAGQVPTAEKLARSQQAIMTGITTVNSIVDRIATESVAEAGKALESKIEAELALAGLAA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGLGILIAIARHVSRPIQRITRSMQELAAGETDKAIPYAGRGDEIGLMAGSVEIFRQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHCC
IARIRLESQAEENRRLAEANRLADQEQAERSAAARLKTATSGLAAGLKRLAEGDLAFQLS
HHEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
DRFAPEFEPLRHDFNASVEQLGGTLLSVSKSVSIINSGTREINNGSSELSGRTERQAATL
HHCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCHHCCCCCHHHCCCHHHHHHHH
EETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGKVVAQTVDAMGQIEESSKQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
NIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAQAAREIKELIG
HHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSAMGQLDQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTQQNAAMVEETTAASVTLASEAERLRELVTQFELGGAESGTRSYRDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVATIVVGFGSALLIGNQAITGQARVAAVVQEAVNAKLASAHIEQQFRQATSVVDRVLSM
CCEEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNFVPAAEVKAAFEERNGALSQSLDELGRVDLAMSLTEGVRSLREAHGAWEADVKVSLGL
HCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECH
QQAGQVPTAEKLARSQQAIMTGITTVNSIVDRIATESVAEAGKALESKIEAELALAGLAA
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIGLGILIAIARHVSRPIQRITRSMQELAAGETDKAIPYAGRGDEIGLMAGSVEIFRQNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECHHHHHHHCC
IARIRLESQAEENRRLAEANRLADQEQAERSAAARLKTATSGLAAGLKRLAEGDLAFQLS
HHEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEH
DRFAPEFEPLRHDFNASVEQLGGTLLSVSKSVSIINSGTREINNGSSELSGRTERQAATL
HHCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCHHCCCCCHHHCCCHHHHHHHH
EETAAALDAVTAKVSQAFKIAEEARNVADNANRSAMASGKVVAQTVDAMGQIEESSKQIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHH
NIIGVIDQIAFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSAQAAREIKELIG
HHHHHHHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
RASAKVASGVELVNHTGAALSDIGRFIVDINQRMEALAASARDQATSLSEVNSAMGQLDQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTQQNAAMVEETTAASVTLASEAERLRELVTQFELGGAESGTRSYRDAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]