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The map label for this gene is virB9 [H]

Identifier: 190571270

GI number: 190571270

Start: 941351

End: 942136

Strand: Reverse

Name: virB9 [H]

Synonym: WPa_0871

Alternate gene names: 190571270

Gene position: 942136-941351 (Counterclockwise)

Preceding gene: 190571271

Following gene: 190571267

Centisome position: 63.55

GC content: 35.37

Gene sequence:

>786_bases
ATGATTAGGGTACTCTTTGTTGCACTATTATTTTTTTGTGGTGGTTATGCACTTGCAAAACAGGAACCAAGACCAATAGC
TGGTGATAACCACATAAAGGTAATGAATTATAATCCACAGGCTATACATAAGTACACGGGCTTTTATGGTTATCAATCCA
GCATATTGTTTGAGCCAGGGGAGGTAATAGAGAGTCTTTCAATGGGTGATGCAACCGGTTGGCAACTCCTTCCTCAAGGT
AATAGATTATTTATTAAGCCTATAGATGATATTGCCGATACTAATGCAACTATAATTACCAACAAAAGAGTTTATTATTT
CGAGTTTCATGCTGAAGAAGCAAACGGGCTAGATGATCCAAGGTTAGCATATGAAGTAAGGTTTCTTTATCCACTGTTCA
ACAGTGATGAAATTTATTCAACGAGTAACGGTGATATTCTAGAGCAAGCTAGTCATACCACTATCCCTGATATAAGTGAT
ATTGAGGTTATAAAGAAAGGCTTGAATTTTAACTATTCCATCTCGCACGTTAAAGGCAGTCAATCAATAATACCAATTAA
GGTTTTTGATGACGGAAAATTTACATATCTACAATTTAATAAAATAAACTCTGATTTCCCGGCAGTTTTTATGGTTGATT
CTGCAGGATATGAATCCTTGATAAATTTTCGTACAGTTGATGACTACCTGATAATTGAAAGAGTAAGCTCGGTATTTACC
TTAAGAAACGGATCAAGCACAGTCTGCCTGTTTAATGAAAACATACCTTTCAAAAAAGGTAAGTGA

Upstream 100 bases:

>100_bases
TTATGAAGCTTGCATTTTCTGTCGCTTACTACTGGGATAGCTTAACAGTTGCAGTACATGTCTATCAATGATAAAATGAA
GATCAGTTTATTTTGATACT

Downstream 100 bases:

>100_bases
TTAAAGGCTATAGTATTCTTATAGGTGCAAAATTCTTTCTATGGTGCTTCGTAATTCCATGAAGGCCAATAGCGCTGAGG
TGTTCTTTTGTTCCATATCC

Product: Putative virB9 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MIRVLFVALLFFCGGYALAKQEPRPIAGDNHIKVMNYNPQAIHKYTGFYGYQSSILFEPGEVIESLSMGDATGWQLLPQG
NRLFIKPIDDIADTNATIITNKRVYYFEFHAEEANGLDDPRLAYEVRFLYPLFNSDEIYSTSNGDILEQASHTTIPDISD
IEVIKKGLNFNYSISHVKGSQSIIPIKVFDDGKFTYLQFNKINSDFPAVFMVDSAGYESLINFRTVDDYLIIERVSSVFT
LRNGSSTVCLFNENIPFKKGK

Sequences:

>Translated_261_residues
MIRVLFVALLFFCGGYALAKQEPRPIAGDNHIKVMNYNPQAIHKYTGFYGYQSSILFEPGEVIESLSMGDATGWQLLPQG
NRLFIKPIDDIADTNATIITNKRVYYFEFHAEEANGLDDPRLAYEVRFLYPLFNSDEIYSTSNGDILEQASHTTIPDISD
IEVIKKGLNFNYSISHVKGSQSIIPIKVFDDGKFTYLQFNKINSDFPAVFMVDSAGYESLINFRTVDDYLIIERVSSVFT
LRNGSSTVCLFNENIPFKKGK
>Mature_261_residues
MIRVLFVALLFFCGGYALAKQEPRPIAGDNHIKVMNYNPQAIHKYTGFYGYQSSILFEPGEVIESLSMGDATGWQLLPQG
NRLFIKPIDDIADTNATIITNKRVYYFEFHAEEANGLDDPRLAYEVRFLYPLFNSDEIYSTSNGDILEQASHTTIPDISD
IEVIKKGLNFNYSISHVKGSQSIIPIKVFDDGKFTYLQFNKINSDFPAVFMVDSAGYESLINFRTVDDYLIIERVSSVFT
LRNGSSTVCLFNENIPFKKGK

Specific function: Unknown

COG id: COG3504

COG function: function code U; Type IV secretory pathway, VirB9 components

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the trbG/virB9 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010258
- InterPro:   IPR014148 [H]

Pfam domain/function: PF03524 CagX [H]

EC number: NA

Molecular weight: Translated: 29556; Mature: 29556

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRVLFVALLFFCGGYALAKQEPRPIAGDNHIKVMNYNPQAIHKYTGFYGYQSSILFEPG
CHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEEEECCH
EVIESLSMGDATGWQLLPQGNRLFIKPIDDIADTNATIITNKRVYYFEFHAEEANGLDDP
HHHHHHCCCCCCCEEEECCCCEEEEEECHHHCCCCEEEEECCEEEEEEEECCCCCCCCCC
RLAYEVRFLYPLFNSDEIYSTSNGDILEQASHTTIPDISDIEVIKKGLNFNYSISHVKGS
CEEEEEEEEEEECCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCC
QSIIPIKVFDDGKFTYLQFNKINSDFPAVFMVDSAGYESLINFRTVDDYLIIERVSSVFT
CCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCHHHHEEEECCHHHHHHHHHHHEE
LRNGSSTVCLFNENIPFKKGK
EECCCCEEEEEECCCCCCCCC
>Mature Secondary Structure
MIRVLFVALLFFCGGYALAKQEPRPIAGDNHIKVMNYNPQAIHKYTGFYGYQSSILFEPG
CHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEEEECCH
EVIESLSMGDATGWQLLPQGNRLFIKPIDDIADTNATIITNKRVYYFEFHAEEANGLDDP
HHHHHHCCCCCCCEEEECCCCEEEEEECHHHCCCCEEEEECCEEEEEEEECCCCCCCCCC
RLAYEVRFLYPLFNSDEIYSTSNGDILEQASHTTIPDISDIEVIKKGLNFNYSISHVKGS
CEEEEEEEEEEECCCCCEEECCCCCHHHHCCCCCCCCCHHHHHHHHCCCCCEEEEEECCC
QSIIPIKVFDDGKFTYLQFNKINSDFPAVFMVDSAGYESLINFRTVDDYLIIERVSSVFT
CCEEEEEEECCCCEEEEEEECCCCCCCEEEEEECCCCHHHHEEEECCHHHHHHHHHHHEE
LRNGSSTVCLFNENIPFKKGK
EECCCCEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12910271; 3584073 [H]