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The map label for this gene is ybjT [C]

Identifier: 190571246

GI number: 190571246

Start: 923481

End: 924431

Strand: Reverse

Name: ybjT [C]

Synonym: WPa_0847

Alternate gene names: 190571246

Gene position: 924431-923481 (Counterclockwise)

Preceding gene: 190571247

Following gene: 190571243

Centisome position: 62.36

GC content: 33.02

Gene sequence:

>951_bases
GTGATAAAACGTATAATTATTTTTGGTGGAACGGGATTTATAGGAAAACACATCGTAAGACGCTTGGCAGCGGCGGGGTA
TTTAATAAGAATATTTACTCGTGATCAGGAAAAAGCTGCTTGTCTGAAGTTATGTGGAAATTTAGGACAAATATCAATAA
TTGAAGGAGATTTTTTTAATGAAAGATCAATTTTAGAAAGTATGGAGGGGTGTGATGTTGTTATAAATTTAGTAGGAATA
TTATATGAAAAAAGAAAATACGATTTCTATGACGTTCATGTTAGAGTAGCTGAAAGAGTAGCAAAAGCTGCGCAAATAAA
AAGTGTATACATGATGATACATTTTTCTGCCATGGGAATAGAAAATAGTAAGCTGTCAAGATACGCCCACAGTAAATTAG
AAGGTGAAAAAGCTGTAACTTCAGCATTTCAGGGAGCAATAATAATTAAGCCAAGTCTTGTATTCGGTAAAGAAGATAGT
TTCTTCAATAAATTTGCAAGATTAGCAACAATTCTTCCTTTTTTGCCGTTAATCGGTAGTGGAATAACGAAGTTTCAGCC
GATATGTGTAACAAACTTAGCTGAAGTGGTATACCGTATTATCAGCTTTAATAAGCAAGATAAAAAAATTTATAATATAG
GTGGACCAAAAGTTTACTCTTTTAAAAGCTTATTAAAGTTTATTCTGAATGTGACTAACAGAAAGTGTCTACTGATCAAT
GTACCTTTTCCAATGGCAAGATTGATAGCCTTTTTCTTAGAAAGTAAAGTTGTTTCTGTACTGTTAAAACCTATAACCGG
AGATGCAAGCCCTATACTTACTCGAGATCAGGTGAAAGTTATGATGAGTAGTTCAATCGAAAAGTCAGATGATCTCGGAA
CAATGAAAATTAGACCACTAGCAATTGAAAATGTGGTACCAGAATACTTGAAAATTTATAGAAAGCATTGA

Upstream 100 bases:

>100_bases
TCATGGAATGAGAATGGACCTTGTAGTGCAGGAATTCACAATAGAATATTAAATAAAACTATTGTATTAATTTAAAGTTA
AGTTATTGGAAGTTTTAACT

Downstream 100 bases:

>100_bases
TAGAAGAATGTGCCCGGTAGGATTCGAACCTACGACCCACAGCTTAGAAGGCTGTTGCTCTATCCAACTGAGCTACGGGC
ACACATCATATATAAAATGC

Product: NADH-ubiquinone oxidoreductase, putative

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; NmrA Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdp-Glucose-46-Dehydratase; NADH-Ubiquinone Oxireductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerases; Nucleoside Diphosphate Sugar Epimerase; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MIKRIIIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQEKAACLKLCGNLGQISIIEGDFFNERSILESMEGCDVVINLVGI
LYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGIENSKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDS
FFNKFARLATILPFLPLIGSGITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFILNVTNRKCLLIN
VPFPMARLIAFFLESKVVSVLLKPITGDASPILTRDQVKVMMSSSIEKSDDLGTMKIRPLAIENVVPEYLKIYRKH

Sequences:

>Translated_316_residues
MIKRIIIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQEKAACLKLCGNLGQISIIEGDFFNERSILESMEGCDVVINLVGI
LYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGIENSKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDS
FFNKFARLATILPFLPLIGSGITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFILNVTNRKCLLIN
VPFPMARLIAFFLESKVVSVLLKPITGDASPILTRDQVKVMMSSSIEKSDDLGTMKIRPLAIENVVPEYLKIYRKH
>Mature_316_residues
MIKRIIIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQEKAACLKLCGNLGQISIIEGDFFNERSILESMEGCDVVINLVGI
LYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGIENSKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDS
FFNKFARLATILPFLPLIGSGITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFILNVTNRKCLLIN
VPFPMARLIAFFLESKVVSVLLKPITGDASPILTRDQVKVMMSSSIEKSDDLGTMKIRPLAIENVVPEYLKIYRKH

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=317, Percent_Identity=31.2302839116719, Blast_Score=134, Evalue=2e-31,
Organism=Escherichia coli, GI87081793, Length=269, Percent_Identity=22.6765799256506, Blast_Score=70, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17556106, Length=235, Percent_Identity=29.7872340425532, Blast_Score=99, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24667554, Length=321, Percent_Identity=29.595015576324, Blast_Score=127, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35586; Mature: 35586

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRIIIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQEKAACLKLCGNLGQISIIEGDFFN
CCEEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCC
ERSILESMEGCDVVINLVGILYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGI
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCC
ENSKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLATILPFLPLIGS
CCHHHHHHHHHHHCCHHHHHHHHCCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHCC
GITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFILNVTNRKCLLIN
CCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
VPFPMARLIAFFLESKVVSVLLKPITGDASPILTRDQVKVMMSSSIEKSDDLGTMKIRPL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCH
AIENVVPEYLKIYRKH
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKRIIIFGGTGFIGKHIVRRLAAAGYLIRIFTRDQEKAACLKLCGNLGQISIIEGDFFN
CCEEEEEECCCCHHHHHHHHHHHHCCEEEEEEECCCHHHHHHHHHCCCCCEEEEECCCCC
ERSILESMEGCDVVINLVGILYEKRKYDFYDVHVRVAERVAKAAQIKSVYMMIHFSAMGI
HHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEHHHCCC
ENSKLSRYAHSKLEGEKAVTSAFQGAIIIKPSLVFGKEDSFFNKFARLATILPFLPLIGS
CCHHHHHHHHHHHCCHHHHHHHHCCEEEEECCEEECCCHHHHHHHHHHHHHHHHHHHHCC
GITKFQPICVTNLAEVVYRIISFNKQDKKIYNIGGPKVYSFKSLLKFILNVTNRKCLLIN
CCHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE
VPFPMARLIAFFLESKVVSVLLKPITGDASPILTRDQVKVMMSSSIEKSDDLGTMKIRPL
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEECCH
AIENVVPEYLKIYRKH
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA