Click here to switch to the map view.

The map label for this gene is rpmE [H]

Identifier: 190571077

GI number: 190571077

Start: 739514

End: 739726

Strand: Direct

Name: rpmE [H]

Synonym: WPa_0672

Alternate gene names: 190571077

Gene position: 739514-739726 (Clockwise)

Preceding gene: 190571074

Following gene: 190571078

Centisome position: 49.88

GC content: 36.62

Gene sequence:

>213_bases
ATGGCAGAAATCGACTATCACAAAGTTACTATAGTTATGACAGATGGTCAAGAGTTTGAAACTTATTCCACTTATGGAAA
AGAAGGTCAAAGAATAAAGCTTGATAGAGATCCTCTTACTCATCCTGCATGGACTGGAAGTTTGACAAGCGGTTCAGGGG
AGAAGGATAGTAAAATAGCTAAGTTTAATGATAAATACGGGAGTCTTTTTTAG

Upstream 100 bases:

>100_bases
AATACTACTTTATTTATTTTTTGTCAATATTTCACAATAATGATTGACCAAATGAACCAGATTCACTAAAATCTTAGCTG
GTAAGAAATTTGTAAGAACA

Downstream 100 bases:

>100_bases
TTCCTCCCCTCTTTATTTAACATGTATAAATATAAAAATGTAGGCTATATTGCTTCTTCGCTACCCAAGTCTCAGGAAGT
ATCTAAACTACTACAGAAAC

Product: ribosomal protein L31

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 70; Mature: 69

Protein sequence:

>70_residues
MAEIDYHKVTIVMTDGQEFETYSTYGKEGQRIKLDRDPLTHPAWTGSLTSGSGEKDSKIAKFNDKYGSLF

Sequences:

>Translated_70_residues
MAEIDYHKVTIVMTDGQEFETYSTYGKEGQRIKLDRDPLTHPAWTGSLTSGSGEKDSKIAKFNDKYGSLF
>Mature_69_residues
AEIDYHKVTIVMTDGQEFETYSTYGKEGQRIKLDRDPLTHPAWTGSLTSGSGEKDSKIAKFNDKYGSLF

Specific function: Binds the 23S rRNA [H]

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type A subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002150 [H]

Pfam domain/function: PF01197 Ribosomal_L31 [H]

EC number: NA

Molecular weight: Translated: 7892; Mature: 7761

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEIDYHKVTIVMTDGQEFETYSTYGKEGQRIKLDRDPLTHPAWTGSLTSGSGEKDSKIA
CCCCCCEEEEEEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
KFNDKYGSLF
EECCCCCCCC
>Mature Secondary Structure 
AEIDYHKVTIVMTDGQEFETYSTYGKEGQRIKLDRDPLTHPAWTGSLTSGSGEKDSKIA
CCCCCEEEEEEEECCCCCCEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEE
KFNDKYGSLF
EECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA