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The map label for this gene is yaaJ [C]

Identifier: 190570509

GI number: 190570509

Start: 24964

End: 26301

Strand: Direct

Name: yaaJ [C]

Synonym: WPa_0033

Alternate gene names: 190570509

Gene position: 24964-26301 (Clockwise)

Preceding gene: 190570506

Following gene: 190570510

Centisome position: 1.68

GC content: 33.41

Gene sequence:

>1338_bases
ATGGATACAGTAAAGTTTGTTTTCTTACTGCCAACAATACTACTCATACTAGTTGCTGGTGTTTACCTATCGGTTAAACT
AAAATGGTTACAGGTGTTTAGACTACCGTATGCCGTTTCACTTATTGGAGCTAAAAGAGGAGAAAATAAATTTTCTTCTA
TAGCCGCCCTGTTTACAATCTTAGGAGGAAATTTAGGAGTAGGAAACGTTTCAGGCACTGCTGTTGCTCTAAAAACCGGA
GGACCAGGATCCATTTTATGGATGGCAATAATTATTGTTGTTACTTCTGTGATAAAATATGTTACTTGTTACCTAAGTAT
AAAAACCAGAAAAGAAAAAAATGGACGGTTTATAGGTGGACCTGTAGCCTACATGACTGATGCATTTAATTCTAGAAAAG
CTACAGTTGTGTTTCTAGTTATTATGATGATGGTTTCAATAACAGTTGGTAACCTTGTTCAGGTAAATTCTCTATCAATA
CCACTCAGCATGGTAGATATACCTGTAGTCATTGGCGGCATTGTAATGGCCATAATATTTTTTGTTGTTGCAGCTCTCAG
CTTAAAAAAAATTAAAATTTTTATATCGGCTATGATACCGATAATGACGGTAAGTTACCTCACACTTTGCGGTATCATAT
TATTTAAGTTTAGTGAAAATATTCTTCCTTCTCTAAAACTAATAACAAGCAATTTTTTTACAACTAGTAGCTTTAACTCT
GGCTTATCTTTAGGTTTAATTTTAGAAATGTTGACTATTATTCAAGTAGGAACTCTGCGAGGTATTTTTGCAACAGATAT
AGGACTTGGCCTCGAAGGAATTGTACACTCCTCGATTACTCCTAAAAAAAATAACAATAAATTTATCATTGAACAAAGTC
TAATCACAATAATATCTCCTTTTATAGTTGCACTCATAGTGTTCATTACAGCAATGGTACTGCTTGTCACAGATTCTTGG
ATTACTGATTTAGAGAGCACTAACATATGCATATTTGCTTTTAGAAAAGCTATGAATTGGCCCTATATTGACTATTTTAT
TATGACCATAATGTTTTGCTTTGCATTTACTACTATTTTTACTTGGTTTTTTTGTTCAAAACAAACAATACGCTATGTAT
CTATGGATAATAAATACACCAAAATCTGGACTGTAGTTTTTACCTTAATCATTCCATTTGGTGCAATTGGTGGAGTTAAG
TTACTCTGGGATATCGCTGATATTTCAATTGCTGCTTTGCTACTCATAAACATACTTGCTATACTCAAGCTCACTTCTCA
AGATCCAGAAGTATTTACTATGAGTAGCAAATACCTGAAGTTGCAAAAACAGAGCTAA

Upstream 100 bases:

>100_bases
TAAGAGGTGCTAGAATAATGAAACCGAAGTCATACATAGAAAATAGGTTGGGTATTTTCAACTTTTGCTATATACTCAAG
TAAAAATCTCTCTTTTACAG

Downstream 100 bases:

>100_bases
AGCAATATTTTAAGTTGTCATCCCAGTCTGGAATCCAGCCTTTCATGAACTTCATCAAAAATTTTATGTTTTAACATAAT
ACTTTTATGCTCACTAACTG

Product: sodium/alanine symporter family protein

Products: Na (I) [Cytoplasm]; L-alanine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 445

Protein sequence:

>445_residues
MDTVKFVFLLPTILLILVAGVYLSVKLKWLQVFRLPYAVSLIGAKRGENKFSSIAALFTILGGNLGVGNVSGTAVALKTG
GPGSILWMAIIIVVTSVIKYVTCYLSIKTRKEKNGRFIGGPVAYMTDAFNSRKATVVFLVIMMMVSITVGNLVQVNSLSI
PLSMVDIPVVIGGIVMAIIFFVVAALSLKKIKIFISAMIPIMTVSYLTLCGIILFKFSENILPSLKLITSNFFTTSSFNS
GLSLGLILEMLTIIQVGTLRGIFATDIGLGLEGIVHSSITPKKNNNKFIIEQSLITIISPFIVALIVFITAMVLLVTDSW
ITDLESTNICIFAFRKAMNWPYIDYFIMTIMFCFAFTTIFTWFFCSKQTIRYVSMDNKYTKIWTVVFTLIIPFGAIGGVK
LLWDIADISIAALLLINILAILKLTSQDPEVFTMSSKYLKLQKQS

Sequences:

>Translated_445_residues
MDTVKFVFLLPTILLILVAGVYLSVKLKWLQVFRLPYAVSLIGAKRGENKFSSIAALFTILGGNLGVGNVSGTAVALKTG
GPGSILWMAIIIVVTSVIKYVTCYLSIKTRKEKNGRFIGGPVAYMTDAFNSRKATVVFLVIMMMVSITVGNLVQVNSLSI
PLSMVDIPVVIGGIVMAIIFFVVAALSLKKIKIFISAMIPIMTVSYLTLCGIILFKFSENILPSLKLITSNFFTTSSFNS
GLSLGLILEMLTIIQVGTLRGIFATDIGLGLEGIVHSSITPKKNNNKFIIEQSLITIISPFIVALIVFITAMVLLVTDSW
ITDLESTNICIFAFRKAMNWPYIDYFIMTIMFCFAFTTIFTWFFCSKQTIRYVSMDNKYTKIWTVVFTLIIPFGAIGGVK
LLWDIADISIAALLLINILAILKLTSQDPEVFTMSSKYLKLQKQS
>Mature_445_residues
MDTVKFVFLLPTILLILVAGVYLSVKLKWLQVFRLPYAVSLIGAKRGENKFSSIAALFTILGGNLGVGNVSGTAVALKTG
GPGSILWMAIIIVVTSVIKYVTCYLSIKTRKEKNGRFIGGPVAYMTDAFNSRKATVVFLVIMMMVSITVGNLVQVNSLSI
PLSMVDIPVVIGGIVMAIIFFVVAALSLKKIKIFISAMIPIMTVSYLTLCGIILFKFSENILPSLKLITSNFFTTSSFNS
GLSLGLILEMLTIIQVGTLRGIFATDIGLGLEGIVHSSITPKKNNNKFIIEQSLITIISPFIVALIVFITAMVLLVTDSW
ITDLESTNICIFAFRKAMNWPYIDYFIMTIMFCFAFTTIFTWFFCSKQTIRYVSMDNKYTKIWTVVFTLIIPFGAIGGVK
LLWDIADISIAALLLINILAILKLTSQDPEVFTMSSKYLKLQKQS

Specific function: Unknown

COG id: COG1115

COG function: function code E; Na+/alanine symporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:alanine (SAF) symporter family [H]

Homologues:

Organism=Escherichia coli, GI1786188, Length=442, Percent_Identity=24.2081447963801, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001463 [H]

Pfam domain/function: PF01235 Na_Ala_symp [H]

EC number: NA

Molecular weight: Translated: 49059; Mature: 49059

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTVKFVFLLPTILLILVAGVYLSVKLKWLQVFRLPYAVSLIGAKRGENKFSSIAALFTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH
LGGNLGVGNVSGTAVALKTGGPGSILWMAIIIVVTSVIKYVTCYLSIKTRKEKNGRFIGG
HCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEECC
PVAYMTDAFNSRKATVVFLVIMMMVSITVGNLVQVNSLSIPLSMVDIPVVIGGIVMAIIF
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FVVAALSLKKIKIFISAMIPIMTVSYLTLCGIILFKFSENILPSLKLITSNFFTTSSFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCCC
GLSLGLILEMLTIIQVGTLRGIFATDIGLGLEGIVHSSITPKKNNNKFIIEQSLITIISP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHH
FIVALIVFITAMVLLVTDSWITDLESTNICIFAFRKAMNWPYIDYFIMTIMFCFAFTTIF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHH
TWFFCSKQTIRYVSMDNKYTKIWTVVFTLIIPFGAIGGVKLLWDIADISIAALLLINILA
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILKLTSQDPEVFTMSSKYLKLQKQS
HHHHCCCCCCEEEECHHHHEEECCC
>Mature Secondary Structure
MDTVKFVFLLPTILLILVAGVYLSVKLKWLQVFRLPYAVSLIGAKRGENKFSSIAALFTI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHH
LGGNLGVGNVSGTAVALKTGGPGSILWMAIIIVVTSVIKYVTCYLSIKTRKEKNGRFIGG
HCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEECC
PVAYMTDAFNSRKATVVFLVIMMMVSITVGNLVQVNSLSIPLSMVDIPVVIGGIVMAIIF
CHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCHHHHHHHHHHHHHHHHHHH
FVVAALSLKKIKIFISAMIPIMTVSYLTLCGIILFKFSENILPSLKLITSNFFTTSSFNS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEECCCCC
GLSLGLILEMLTIIQVGTLRGIFATDIGLGLEGIVHSSITPKKNNNKFIIEQSLITIISP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCEEEEHHHHHHHHHH
FIVALIVFITAMVLLVTDSWITDLESTNICIFAFRKAMNWPYIDYFIMTIMFCFAFTTIF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHH
TWFFCSKQTIRYVSMDNKYTKIWTVVFTLIIPFGAIGGVKLLWDIADISIAALLLINILA
HHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
ILKLTSQDPEVFTMSSKYLKLQKQS
HHHHCCCCCCEEEECHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Na (I) [Periplasm]; L-alanine [Periplasm] [C]

Specific reaction: Na (I) [Periplasm] + L-alanine [Periplasm] = Na (I) [Cytoplasm] + L-alanine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]