The gene/protein map for NC_010831 is currently unavailable.
Definition Chlorobium phaeobacteroides BS1 chromosome, complete genome.
Accession NC_010831
Length 2,736,403

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The map label for this gene is ybbO [C]

Identifier: 189499227

GI number: 189499227

Start: 239220

End: 239891

Strand: Direct

Name: ybbO [C]

Synonym: Cphamn1_0247

Alternate gene names: 189499227

Gene position: 239220-239891 (Clockwise)

Preceding gene: 189499225

Following gene: 189499228

Centisome position: 8.74

GC content: 53.57

Gene sequence:

>672_bases
ATGGATCTGAAAGGCAGAACTGCGGTGGTGACGGGTTCAAGTTCGGGCATCGGACAGGAACTTTGTACAATGCTGGCGCA
AAAAGGCGCGGCGGTATACGGTTTCAGCAGGCGCCGGTCTGTTGTCGAACACCCCTCGTTTACCTGGATGCAGACGGATG
TGACAAAGCAGGAAGAAATTGATAGGGCATTCGATACTGTTTTACGTGCGCATCAGCGCGTCGATCTGCTGGTTAACAAT
GCGGGATTCGGTCTCTTTGGCAGCATTGAGACGCTTGACCCTGAAGCATGGAACAGGCTGATTGCAACCAATCTGACGGC
AGCGTTTCTCTGTACCCGAAGGGTTGTCTCCGGTATGAAAGAGGCCGGACGTGGAACGATTGTCAATGTCGCTTCAATTG
CCGGGAAGCGCGGGTTCAGGAACGGATCGGCATACTGTGCCTCCAAGTTCGGGCTGAACGGTTTTTCCGAAGCACTCGTT
GAAGAGCTTCGCGAGGAGGGAATCCGTGTCTGCAGTATCAACCCCGGCTCAACCGGAACGGAGTTTTTCGAGCATGCGGG
CATCGAACCGAAAAAACTGATGAAGACCGGGGATGTTGCCTCTCTGATCCTTACTATGATTGAACTTCCTGATGACATGC
TGCCGGATCAGGTGGTTGTCCGCCCACTGTAA

Upstream 100 bases:

>100_bases
TTAGTCGGCAGATAGGTTGTCTGTTGCCAAAGTTAATATTTCTAAACGTTTTTCTTTACTTTTGATGAGATGAGCATACA
GGGAGAAAAACAATGAAGCT

Downstream 100 bases:

>100_bases
ACAGAACGCACATACCATGAATGAACCAGTTTCCCTTCCTCTCCAGGGTGAGCCGATTGCCGCTGTTGCTACTCCGGTAG
GGGTCGGCGCGCTTGCTGTG

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MDLKGRTAVVTGSSSGIGQELCTMLAQKGAAVYGFSRRRSVVEHPSFTWMQTDVTKQEEIDRAFDTVLRAHQRVDLLVNN
AGFGLFGSIETLDPEAWNRLIATNLTAAFLCTRRVVSGMKEAGRGTIVNVASIAGKRGFRNGSAYCASKFGLNGFSEALV
EELREEGIRVCSINPGSTGTEFFEHAGIEPKKLMKTGDVASLILTMIELPDDMLPDQVVVRPL

Sequences:

>Translated_223_residues
MDLKGRTAVVTGSSSGIGQELCTMLAQKGAAVYGFSRRRSVVEHPSFTWMQTDVTKQEEIDRAFDTVLRAHQRVDLLVNN
AGFGLFGSIETLDPEAWNRLIATNLTAAFLCTRRVVSGMKEAGRGTIVNVASIAGKRGFRNGSAYCASKFGLNGFSEALV
EELREEGIRVCSINPGSTGTEFFEHAGIEPKKLMKTGDVASLILTMIELPDDMLPDQVVVRPL
>Mature_223_residues
MDLKGRTAVVTGSSSGIGQELCTMLAQKGAAVYGFSRRRSVVEHPSFTWMQTDVTKQEEIDRAFDTVLRAHQRVDLLVNN
AGFGLFGSIETLDPEAWNRLIATNLTAAFLCTRRVVSGMKEAGRGTIVNVASIAGKRGFRNGSAYCASKFGLNGFSEALV
EELREEGIRVCSINPGSTGTEFFEHAGIEPKKLMKTGDVASLILTMIELPDDMLPDQVVVRPL

Specific function: Unknown

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=28.0487804878049, Blast_Score=94, Evalue=7e-20,
Organism=Homo sapiens, GI7657478, Length=190, Percent_Identity=33.1578947368421, Blast_Score=92, Evalue=3e-19,
Organism=Homo sapiens, GI32483357, Length=190, Percent_Identity=34.7368421052632, Blast_Score=91, Evalue=7e-19,
Organism=Homo sapiens, GI7705925, Length=196, Percent_Identity=32.6530612244898, Blast_Score=85, Evalue=4e-17,
Organism=Homo sapiens, GI4503817, Length=197, Percent_Identity=30.4568527918782, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI40254992, Length=221, Percent_Identity=29.8642533936652, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI31542939, Length=200, Percent_Identity=32, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI223718074, Length=214, Percent_Identity=30.3738317757009, Blast_Score=81, Evalue=9e-16,
Organism=Homo sapiens, GI126723191, Length=178, Percent_Identity=33.1460674157303, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI22507405, Length=199, Percent_Identity=32.6633165829146, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI19923817, Length=246, Percent_Identity=25.609756097561, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI7706318, Length=213, Percent_Identity=30.5164319248826, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI15277342, Length=213, Percent_Identity=28.169014084507, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI4758504, Length=239, Percent_Identity=28.8702928870293, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI126723750, Length=203, Percent_Identity=30.0492610837438, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI20149619, Length=195, Percent_Identity=29.2307692307692, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI166795268, Length=212, Percent_Identity=29.2452830188679, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI5031737, Length=190, Percent_Identity=31.5789473684211, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI210032110, Length=212, Percent_Identity=25.9433962264151, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI33667109, Length=190, Percent_Identity=31.5789473684211, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI224922801, Length=172, Percent_Identity=30.8139534883721, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI66933014, Length=183, Percent_Identity=26.2295081967213, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI146231950, Length=208, Percent_Identity=30.2884615384615, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI44680136, Length=101, Percent_Identity=32.6732673267327, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI44680133, Length=101, Percent_Identity=32.6732673267327, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI17738292, Length=101, Percent_Identity=32.6732673267327, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1786701, Length=184, Percent_Identity=33.695652173913, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787335, Length=182, Percent_Identity=31.8681318681319, Blast_Score=94, Evalue=6e-21,
Organism=Escherichia coli, GI87082160, Length=187, Percent_Identity=31.0160427807487, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787526, Length=220, Percent_Identity=28.1818181818182, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1786812, Length=182, Percent_Identity=31.3186813186813, Blast_Score=84, Evalue=8e-18,
Organism=Escherichia coli, GI1790717, Length=189, Percent_Identity=31.2169312169312, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1788459, Length=223, Percent_Identity=26.9058295964126, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI2367175, Length=203, Percent_Identity=32.512315270936, Blast_Score=80, Evalue=9e-17,
Organism=Escherichia coli, GI1787820, Length=182, Percent_Identity=30.7692307692308, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1789208, Length=187, Percent_Identity=27.2727272727273, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI2367365, Length=183, Percent_Identity=29.5081967213115, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1789057, Length=187, Percent_Identity=29.9465240641711, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI87082100, Length=191, Percent_Identity=27.2251308900524, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI115534694, Length=207, Percent_Identity=31.4009661835749, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=29.9492385786802, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17560676, Length=190, Percent_Identity=30.5263157894737, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI193203117, Length=198, Percent_Identity=29.2929292929293, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17555706, Length=202, Percent_Identity=30.1980198019802, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17555612, Length=230, Percent_Identity=30.4347826086957, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17562904, Length=209, Percent_Identity=29.6650717703349, Blast_Score=81, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17562908, Length=240, Percent_Identity=27.9166666666667, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17562906, Length=214, Percent_Identity=28.9719626168224, Blast_Score=78, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=206, Percent_Identity=26.6990291262136, Blast_Score=77, Evalue=5e-15,
Organism=Caenorhabditis elegans, GI17560150, Length=201, Percent_Identity=28.3582089552239, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538182, Length=189, Percent_Identity=32.8042328042328, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=195, Percent_Identity=29.2307692307692, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17560220, Length=237, Percent_Identity=25.3164556962025, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17551412, Length=203, Percent_Identity=29.5566502463054, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI72000259, Length=204, Percent_Identity=27.4509803921569, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI86565303, Length=214, Percent_Identity=27.5700934579439, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71994604, Length=192, Percent_Identity=26.5625, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=201, Percent_Identity=27.363184079602, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI17562910, Length=214, Percent_Identity=28.5046728971963, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17538480, Length=199, Percent_Identity=27.6381909547739, Blast_Score=69, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17559104, Length=196, Percent_Identity=28.0612244897959, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558006, Length=207, Percent_Identity=28.5024154589372, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=206, Percent_Identity=28.1553398058252, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=204, Percent_Identity=25, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193204405, Length=215, Percent_Identity=27.906976744186, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71997099, Length=206, Percent_Identity=27.1844660194175, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17560332, Length=196, Percent_Identity=27.0408163265306, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI71997402, Length=186, Percent_Identity=29.5698924731183, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI17564282, Length=194, Percent_Identity=25.2577319587629, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71994600, Length=193, Percent_Identity=24.8704663212435, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17508895, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI115534660, Length=201, Percent_Identity=25.8706467661692, Blast_Score=64, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=198, Percent_Identity=32.8282828282828, Blast_Score=89, Evalue=5e-19,
Organism=Saccharomyces cerevisiae, GI6322067, Length=187, Percent_Identity=32.0855614973262, Blast_Score=70, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322226, Length=186, Percent_Identity=26.3440860215054, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320089, Length=192, Percent_Identity=27.6041666666667, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI28571526, Length=203, Percent_Identity=31.0344827586207, Blast_Score=100, Evalue=9e-22,
Organism=Drosophila melanogaster, GI28571387, Length=239, Percent_Identity=29.7071129707113, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24644339, Length=205, Percent_Identity=31.219512195122, Blast_Score=99, Evalue=2e-21,
Organism=Drosophila melanogaster, GI23397609, Length=195, Percent_Identity=33.8461538461538, Blast_Score=98, Evalue=4e-21,
Organism=Drosophila melanogaster, GI21357041, Length=203, Percent_Identity=31.0344827586207, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24641232, Length=242, Percent_Identity=28.5123966942149, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI116007236, Length=238, Percent_Identity=27.3109243697479, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24641388, Length=241, Percent_Identity=29.045643153527, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355319, Length=190, Percent_Identity=29.4736842105263, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24643142, Length=180, Percent_Identity=32.2222222222222, Blast_Score=86, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281364494, Length=245, Percent_Identity=25.7142857142857, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24648693, Length=243, Percent_Identity=27.1604938271605, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI21355889, Length=243, Percent_Identity=27.1604938271605, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI281364892, Length=205, Percent_Identity=29.2682926829268, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24663911, Length=241, Percent_Identity=28.6307053941909, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21356301, Length=194, Percent_Identity=29.8969072164948, Blast_Score=81, Evalue=6e-16,
Organism=Drosophila melanogaster, GI116007234, Length=239, Percent_Identity=30.1255230125523, Blast_Score=81, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24639444, Length=188, Percent_Identity=31.3829787234043, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=24.8704663212435, Blast_Score=78, Evalue=5e-15,
Organism=Drosophila melanogaster, GI24580925, Length=201, Percent_Identity=29.8507462686567, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007238, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24640492, Length=188, Percent_Identity=27.1276595744681, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI17737361, Length=239, Percent_Identity=27.1966527196653, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24648944, Length=238, Percent_Identity=26.4705882352941, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355631, Length=173, Percent_Identity=28.3236994219653, Blast_Score=72, Evalue=2e-13,
Organism=Drosophila melanogaster, GI28574402, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24584744, Length=197, Percent_Identity=29.4416243654822, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI18859837, Length=173, Percent_Identity=30.635838150289, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI221510726, Length=161, Percent_Identity=32.9192546583851, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI161076371, Length=204, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI24640442, Length=194, Percent_Identity=30.9278350515464, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24644337, Length=138, Percent_Identity=30.4347826086957, Blast_Score=66, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 24230; Mature: 24230

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MDLKGRTAVVTGSSSGIGQELCTMLAQKGAAVYGFSRRRSVVEHPSFTWMQTDVTKQEEI
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCEEEECCCCHHHHH
DRAFDTVLRAHQRVDLLVNNAGFGLFGSIETLDPEAWNRLIATNLTAAFLCTRRVVSGMK
HHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGRGTIVNVASIAGKRGFRNGSAYCASKFGLNGFSEALVEELREEGIRVCSINPGSTGT
HCCCCCEEEHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHH
EFFEHAGIEPKKLMKTGDVASLILTMIELPDDMLPDQVVVRPL
HHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEECCC
>Mature Secondary Structure
MDLKGRTAVVTGSSSGIGQELCTMLAQKGAAVYGFSRRRSVVEHPSFTWMQTDVTKQEEI
CCCCCCEEEEECCCCCHHHHHHHHHHHCCCEEECHHHHHHHHCCCCCEEEECCCCHHHHH
DRAFDTVLRAHQRVDLLVNNAGFGLFGSIETLDPEAWNRLIATNLTAAFLCTRRVVSGMK
HHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAGRGTIVNVASIAGKRGFRNGSAYCASKFGLNGFSEALVEELREEGIRVCSINPGSTGT
HCCCCCEEEHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCCHH
EFFEHAGIEPKKLMKTGDVASLILTMIELPDDMLPDQVVVRPL
HHHHHCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA