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The map label for this gene is nlpC [H]

Identifier: 189499210

GI number: 189499210

Start: 220074

End: 220640

Strand: Direct

Name: nlpC [H]

Synonym: Cphamn1_0230

Alternate gene names: 189499210

Gene position: 220074-220640 (Clockwise)

Preceding gene: 189499206

Following gene: 189499211

Centisome position: 8.04

GC content: 50.62

Gene sequence:

>567_bases
ATGCATGCTTCGTTGTTTCTGATCTGTTTTTCCTTTTTCCTCTCCCTTGGCCTTCCGACTGAATCGTTCGCTTCCATTAC
ACCTGAAAAAAATGTCATTGAGCAGAGGCTTGAAAAGCCAGCATGTTCCATGAGCAGCTTTTTCAATGACGTCAGGCAGT
TTTTCGGGGTCAGGTACCGCTGGGGCGGGCAGACGCCTGAAGGGTTTGACTGTTCGGGTTTCGTGAAGTTCATGTATGAA
CGGGTGTTCAGTATGCGGCTTCCCCGGACATCGATTGAAATGGCTTCGATCGGGGAAAAAGTCGAGCGTGATGAACTCAG
GCCTGGCGATCTGGTGTTTTTCAACACACGCGGGAAACGCATCAACCACGTCGGCATCTTCATCGGCAACGGTACCTTCA
TACACGCTTCGGTATCAAGAGGCGTTACGGAAGACCGGCTACAGCAGAACTATTTCGCAAAGCGTTTCGTCGGAGCTGTC
CGGGTGATCGACAACATCATTCCCGCCATACCTGACTTTTCAACTCCTTCCGAAGAAGAAAGTAACGAGTCTGCACAGCA
CTCGTGA

Upstream 100 bases:

>100_bases
CCCTCCTGCGTATTGGTTTTCGACAACAGAAGCGATCCTGTCTATGCTGCACCGACATGTTTTCTGCCGGCTTCGTGCAG
TTTCGGGTAAAGCGCGCCGT

Downstream 100 bases:

>100_bases
AAAACAGTTTCTCCTGTCGTGTCCGGAGGTGCTGTTCAAACGTAGCCTCGCCTACTATCACCACAATGTGAATCTGTGAT
TGCAATTTTCATTTGAAATA

Product: NLP/P60 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MHASLFLICFSFFLSLGLPTESFASITPEKNVIEQRLEKPACSMSSFFNDVRQFFGVRYRWGGQTPEGFDCSGFVKFMYE
RVFSMRLPRTSIEMASIGEKVERDELRPGDLVFFNTRGKRINHVGIFIGNGTFIHASVSRGVTEDRLQQNYFAKRFVGAV
RVIDNIIPAIPDFSTPSEEESNESAQHS

Sequences:

>Translated_188_residues
MHASLFLICFSFFLSLGLPTESFASITPEKNVIEQRLEKPACSMSSFFNDVRQFFGVRYRWGGQTPEGFDCSGFVKFMYE
RVFSMRLPRTSIEMASIGEKVERDELRPGDLVFFNTRGKRINHVGIFIGNGTFIHASVSRGVTEDRLQQNYFAKRFVGAV
RVIDNIIPAIPDFSTPSEEESNESAQHS
>Mature_188_residues
MHASLFLICFSFFLSLGLPTESFASITPEKNVIEQRLEKPACSMSSFFNDVRQFFGVRYRWGGQTPEGFDCSGFVKFMYE
RVFSMRLPRTSIEMASIGEKVERDELRPGDLVFFNTRGKRINHVGIFIGNGTFIHASVSRGVTEDRLQQNYFAKRFVGAV
RVIDNIIPAIPDFSTPSEEESNESAQHS

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1788501, Length=169, Percent_Identity=36.094674556213, Blast_Score=106, Evalue=9e-25,
Organism=Escherichia coli, GI1788001, Length=128, Percent_Identity=42.1875, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1787944, Length=121, Percent_Identity=41.3223140495868, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1786421, Length=118, Percent_Identity=35.5932203389831, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 21354; Mature: 21354

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHASLFLICFSFFLSLGLPTESFASITPEKNVIEQRLEKPACSMSSFFNDVRQFFGVRYR
CCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE
WGGQTPEGFDCSGFVKFMYERVFSMRLPRTSIEMASIGEKVERDELRPGDLVFFNTRGKR
ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCE
INHVGIFIGNGTFIHASVSRGVTEDRLQQNYFAKRFVGAVRVIDNIIPAIPDFSTPSEEE
EEEEEEEECCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SNESAQHS
CCCCCCCC
>Mature Secondary Structure
MHASLFLICFSFFLSLGLPTESFASITPEKNVIEQRLEKPACSMSSFFNDVRQFFGVRYR
CCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCEEE
WGGQTPEGFDCSGFVKFMYERVFSMRLPRTSIEMASIGEKVERDELRPGDLVFFNTRGKR
ECCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCE
INHVGIFIGNGTFIHASVSRGVTEDRLQQNYFAKRFVGAVRVIDNIIPAIPDFSTPSEEE
EEEEEEEECCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SNESAQHS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]