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The map label for this gene is degT [H]

Identifier: 189424565

GI number: 189424565

Start: 1575688

End: 1577295

Strand: Reverse

Name: degT [H]

Synonym: Glov_1506

Alternate gene names: 189424565

Gene position: 1577295-1575688 (Counterclockwise)

Preceding gene: 189424566

Following gene: 189424564

Centisome position: 40.26

GC content: 50.44

Gene sequence:

>1608_bases
TTGAGAGGTGATAAACATCTACTACTTGATGTAAACGTGATAGTTGACACTTGGTTGGGGCTAGGTTCTGAAGAGATCAC
AGAAAAGATTTTAGATCTCTCAAGAGCTGATCAGGTAAAGCTGTGGTTATCAGCGTCCAGCATTCCAACCATTGAATATG
TTGCCAAGCGTTCATTTAAGCAGCGTGGTGTCCCACCAGATGAGGTACAAACTCTGGTCTCTGGACTGATGACGGATCTT
TTTCAATGTGTCGATATTCTAACCAACTATGGCTTTGATCAGAAGGGAATCTACAGCTCTGCTAAAGACTTTGAAGATGC
TCAGATTGCTGCTTCGATCAGAAGCCTGCATGGTGCATCTGTGTGTATTGTCTCTGAAGATGAGGAGTTTGATGCATTAG
GTGAAGTACCTGTTTTTAATCCAGCGCAAGCCTTGGCCTGGATAACATCTAGCGATACTGCGAAGGGATCAATTCCCTTT
ATTGATCTGGCAGCACAGCAACACCGGATTTTGCCAAACATTGAGAAAAATATTGCGACAGTTCTTCGTCACGGCCAGTA
CATCATGGGGCCAGAAATCAAGCAACTGGAAGAAAAATTGGCTACCTACACCGGTGCACAGCACTGCATCACCGTAGCCA
GCGGTACCGAGGCGCTGCTGATCAGCCTGATGGCGTTGGGTATAGGCCCAGGCGTTGAAGTCATCACCCCCCCCTTTACC
TTTGTTGCCACTGCCGAAGTGATTGTCCTCTTGGGTGCCACACCGGTCTTTGTGGATGTTGAGCCTGACACCTGCAACAT
TGACCCCAGCAAGATAAAGGCAGCCATTACTGACAAAACAAAGGCCATCATCCCGGTCAGCCTGTATGGGCAACCGGCCG
ATATGGATGAGATCAACGCCGTTGCAGCAAAGCATGGTTTGCCGGTTATTGAAGACGCCTGCCAGTCCTTTGGCGCCACC
TACAAAGGCAGAAAATCCTGCAACGTAAGCACGGTCGGCTGCACCAGCTTCTTTCCCAGTAAACCGCTAGGCTGCTATGG
CGATGGCGGAGCCATCTTCACCAGTGATGACGCCCTAGCCCAGGCCTGCCGTGAGATAAGGGTGCATGGCCAGAGCAAAC
GGTATGTCCATACCCGCATCGGTGTTGGCGGGCGGTTTGACACCATCCAGGCTGCCGTGCTGCTGGCCAAATTAGAACAG
TTTGAGTGGGAAATAAAACAGCGGATCAAGATCGGTGCGCAGTACAATCAACTGATGGATCAACACGGTATCCAGCGGGT
ACAGCAACGGCCTGATCGAACCGGCGTCTTCGCCCAGTACACCGTGTTGGTGGATAATCGAGATGAGCTGCAGAAGAGGT
TAACTGAAGGCGTCTCTTCTTCATCCTTCACTCTTCCCCCTTCACCCTTGTCCATCCCCACCGCAGTCCACTATCCGATT
CCGTTGAATGAACAACCTGCCTATAAAACTCTGTGCAAAGGTGCTGAAACACCAGTGGCAGCCGCACTGGCACAACGGGT
CATAAGCCTGCCGATGCACGCGTATCTTGCAACAGATCAACAGATAGCTATCTCTACTACAGTCGCTGGAGCTGGAGTTA
TAAAGTGA

Upstream 100 bases:

>100_bases
CGCCTTGACGCACTACTTGGTAAATGGCGACATCATGGTGGACCATCAGGCAAAGCAGATTACAAGGCACTGTGGCATGA
GCATCTGGAGGAGAAGTACA

Downstream 100 bases:

>100_bases
AGATTGTAACCATCATCGGGGCACGCCCGCAATTTATCAAGGCAGCTGCCGTCAGCCGTTCCATTGCGGCTCATATCGCA
GCGCGAAACGATCAACAATC

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MRGDKHLLLDVNVIVDTWLGLGSEEITEKILDLSRADQVKLWLSASSIPTIEYVAKRSFKQRGVPPDEVQTLVSGLMTDL
FQCVDILTNYGFDQKGIYSSAKDFEDAQIAASIRSLHGASVCIVSEDEEFDALGEVPVFNPAQALAWITSSDTAKGSIPF
IDLAAQQHRILPNIEKNIATVLRHGQYIMGPEIKQLEEKLATYTGAQHCITVASGTEALLISLMALGIGPGVEVITPPFT
FVATAEVIVLLGATPVFVDVEPDTCNIDPSKIKAAITDKTKAIIPVSLYGQPADMDEINAVAAKHGLPVIEDACQSFGAT
YKGRKSCNVSTVGCTSFFPSKPLGCYGDGGAIFTSDDALAQACREIRVHGQSKRYVHTRIGVGGRFDTIQAAVLLAKLEQ
FEWEIKQRIKIGAQYNQLMDQHGIQRVQQRPDRTGVFAQYTVLVDNRDELQKRLTEGVSSSSFTLPPSPLSIPTAVHYPI
PLNEQPAYKTLCKGAETPVAAALAQRVISLPMHAYLATDQQIAISTTVAGAGVIK

Sequences:

>Translated_535_residues
MRGDKHLLLDVNVIVDTWLGLGSEEITEKILDLSRADQVKLWLSASSIPTIEYVAKRSFKQRGVPPDEVQTLVSGLMTDL
FQCVDILTNYGFDQKGIYSSAKDFEDAQIAASIRSLHGASVCIVSEDEEFDALGEVPVFNPAQALAWITSSDTAKGSIPF
IDLAAQQHRILPNIEKNIATVLRHGQYIMGPEIKQLEEKLATYTGAQHCITVASGTEALLISLMALGIGPGVEVITPPFT
FVATAEVIVLLGATPVFVDVEPDTCNIDPSKIKAAITDKTKAIIPVSLYGQPADMDEINAVAAKHGLPVIEDACQSFGAT
YKGRKSCNVSTVGCTSFFPSKPLGCYGDGGAIFTSDDALAQACREIRVHGQSKRYVHTRIGVGGRFDTIQAAVLLAKLEQ
FEWEIKQRIKIGAQYNQLMDQHGIQRVQQRPDRTGVFAQYTVLVDNRDELQKRLTEGVSSSSFTLPPSPLSIPTAVHYPI
PLNEQPAYKTLCKGAETPVAAALAQRVISLPMHAYLATDQQIAISTTVAGAGVIK
>Mature_535_residues
MRGDKHLLLDVNVIVDTWLGLGSEEITEKILDLSRADQVKLWLSASSIPTIEYVAKRSFKQRGVPPDEVQTLVSGLMTDL
FQCVDILTNYGFDQKGIYSSAKDFEDAQIAASIRSLHGASVCIVSEDEEFDALGEVPVFNPAQALAWITSSDTAKGSIPF
IDLAAQQHRILPNIEKNIATVLRHGQYIMGPEIKQLEEKLATYTGAQHCITVASGTEALLISLMALGIGPGVEVITPPFT
FVATAEVIVLLGATPVFVDVEPDTCNIDPSKIKAAITDKTKAIIPVSLYGQPADMDEINAVAAKHGLPVIEDACQSFGAT
YKGRKSCNVSTVGCTSFFPSKPLGCYGDGGAIFTSDDALAQACREIRVHGQSKRYVHTRIGVGGRFDTIQAAVLLAKLEQ
FEWEIKQRIKIGAQYNQLMDQHGIQRVQQRPDRTGVFAQYTVLVDNRDELQKRLTEGVSSSSFTLPPSPLSIPTAVHYPI
PLNEQPAYKTLCKGAETPVAAALAQRVISLPMHAYLATDQQIAISTTVAGAGVIK

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=193, Percent_Identity=45.0777202072539, Blast_Score=159, Evalue=5e-40,
Organism=Escherichia coli, GI2367285, Length=357, Percent_Identity=33.0532212885154, Blast_Score=155, Evalue=6e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 57895; Mature: 57895

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGDKHLLLDVNVIVDTWLGLGSEEITEKILDLSRADQVKLWLSASSIPTIEYVAKRSFK
CCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
QRGVPPDEVQTLVSGLMTDLFQCVDILTNYGFDQKGIYSSAKDFEDAQIAASIRSLHGAS
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE
VCIVSEDEEFDALGEVPVFNPAQALAWITSSDTAKGSIPFIDLAAQQHRILPNIEKNIAT
EEEEECCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCEEEECCHHHCCCCCHHHHHHH
VLRHGQYIMGPEIKQLEEKLATYTGAQHCITVASGTEALLISLMALGIGPGVEVITPPFT
HHHCCCEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEECCCHH
FVATAEVIVLLGATPVFVDVEPDTCNIDPSKIKAAITDKTKAIIPVSLYGQPADMDEINA
HHHHHHHHEEECCCEEEEEECCCCCCCCHHHHEEHEECCCCEEEEEEECCCCCCHHHHHH
VAAKHGLPVIEDACQSFGATYKGRKSCNVSTVGCTSFFPSKPLGCYGDGGAIFTSDDALA
HHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCEEEECCHHHH
QACREIRVHGQSKRYVHTRIGVGGRFDTIQAAVLLAKLEQFEWEIKQRIKIGAQYNQLMD
HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
QHGIQRVQQRPDRTGVFAQYTVLVDNRDELQKRLTEGVSSSSFTLPPSPLSIPTAVHYPI
HHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
PLNEQPAYKTLCKGAETPVAAALAQRVISLPMHAYLATDQQIAISTTVAGAGVIK
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MRGDKHLLLDVNVIVDTWLGLGSEEITEKILDLSRADQVKLWLSASSIPTIEYVAKRSFK
CCCCCEEEEEHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHH
QRGVPPDEVQTLVSGLMTDLFQCVDILTNYGFDQKGIYSSAKDFEDAQIAASIRSLHGAS
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCE
VCIVSEDEEFDALGEVPVFNPAQALAWITSSDTAKGSIPFIDLAAQQHRILPNIEKNIAT
EEEEECCCCCCCCCCCCCCCCHHHHEEEECCCCCCCCCCEEEECCHHHCCCCCHHHHHHH
VLRHGQYIMGPEIKQLEEKLATYTGAQHCITVASGTEALLISLMALGIGPGVEVITPPFT
HHHCCCEECCCCHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEECCCHH
FVATAEVIVLLGATPVFVDVEPDTCNIDPSKIKAAITDKTKAIIPVSLYGQPADMDEINA
HHHHHHHHEEECCCEEEEEECCCCCCCCHHHHEEHEECCCCEEEEEEECCCCCCHHHHHH
VAAKHGLPVIEDACQSFGATYKGRKSCNVSTVGCTSFFPSKPLGCYGDGGAIFTSDDALA
HHHHCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCEECCCCEEEECCHHHH
QACREIRVHGQSKRYVHTRIGVGGRFDTIQAAVLLAKLEQFEWEIKQRIKIGAQYNQLMD
HHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
QHGIQRVQQRPDRTGVFAQYTVLVDNRDELQKRLTEGVSSSSFTLPPSPLSIPTAVHYPI
HHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
PLNEQPAYKTLCKGAETPVAAALAQRVISLPMHAYLATDQQIAISTTVAGAGVIK
CCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCHHHHCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]