| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424539
Identifier: 189424539
GI number: 189424539
Start: 1543222
End: 1543791
Strand: Reverse
Name: 189424539
Synonym: Glov_1477
Alternate gene names: NA
Gene position: 1543791-1543222 (Counterclockwise)
Preceding gene: 189424549
Following gene: 189424538
Centisome position: 39.4
GC content: 62.11
Gene sequence:
>570_bases ATGCCACCGACACCCGCACATACCTCTCTGAGACCGCTGCGACGGGGCATTGCCGCCCTGATGACCGCCATCTACCTGCT GATTGCAGCGGGACCGTTGCCCTCACTGGCGCTCCAACCGCATCAGCATGCCCACGACGGCCGGGTTGCCTGCAGCGGAG ACTGCACGCGGGACGGCTGTTCCCTGCAGAGTCAATTGAATCGCACCTGCTGTTGCTGGAAGAAAAAGCAGCCGGAAAAC CGTCCTCCGGAATCTGCCGCCAACACGGCTGATTGCTGTCACACCACGCTGTCCGCCGAATCGGTCCACGCCGTACTGGA AGAAACCATCACTACCCGGCAGGCCGAACTGCCCGCACCACAGGCTGCAGAGACGGTTCTCAGCTGCGGCTGCCCCTGCG GTGACAGCAGCCAGTCCGCACTGCTTAATAGCCAGGGCAATGAAGGCATGCCGTTTATCTACCGGGTGGTCATTGTGCCG CCTGAAAAATCACCCTATCCACCCTCCCCCGTCAGCACTCTGCACTCGCCCTCATCCAGGCCGTTGCTCCCCCCTCCAAA GCCTGTCTGA
Upstream 100 bases:
>100_bases ACCAACCAACTCAACAACATTTAAACAAACGTTTAATATCAGACACTTAGCACCAACGGCACGGTTCTTGATAAAGAGAG ACAAGCAATCAGGAGCCCTT
Downstream 100 bases:
>100_bases TCCAGACAATCAGCGCCGTAATCGACATTTGATCCTTACGACTGACAACGCTATGGAGGACTACTGCCATGACCGTACAA CAGCTTTCGCTGCTGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MPPTPAHTSLRPLRRGIAALMTAIYLLIAAGPLPSLALQPHQHAHDGRVACSGDCTRDGCSLQSQLNRTCCCWKKKQPEN RPPESAANTADCCHTTLSAESVHAVLEETITTRQAELPAPQAAETVLSCGCPCGDSSQSALLNSQGNEGMPFIYRVVIVP PEKSPYPPSPVSTLHSPSSRPLLPPPKPV
Sequences:
>Translated_189_residues MPPTPAHTSLRPLRRGIAALMTAIYLLIAAGPLPSLALQPHQHAHDGRVACSGDCTRDGCSLQSQLNRTCCCWKKKQPEN RPPESAANTADCCHTTLSAESVHAVLEETITTRQAELPAPQAAETVLSCGCPCGDSSQSALLNSQGNEGMPFIYRVVIVP PEKSPYPPSPVSTLHSPSSRPLLPPPKPV >Mature_188_residues PPTPAHTSLRPLRRGIAALMTAIYLLIAAGPLPSLALQPHQHAHDGRVACSGDCTRDGCSLQSQLNRTCCCWKKKQPENR PPESAANTADCCHTTLSAESVHAVLEETITTRQAELPAPQAAETVLSCGCPCGDSSQSALLNSQGNEGMPFIYRVVIVPP EKSPYPPSPVSTLHSPSSRPLLPPPKPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20072; Mature: 19941
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPTPAHTSLRPLRRGIAALMTAIYLLIAAGPLPSLALQPHQHAHDGRVACSGDCTRDGC CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC SLQSQLNRTCCCWKKKQPENRPPESAANTADCCHTTLSAESVHAVLEETITTRQAELPAP HHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QAAETVLSCGCPCGDSSQSALLNSQGNEGMPFIYRVVIVPPEKSPYPPSPVSTLHSPSSR HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCC PLLPPPKPV CCCCCCCCC >Mature Secondary Structure PPTPAHTSLRPLRRGIAALMTAIYLLIAAGPLPSLALQPHQHAHDGRVACSGDCTRDGC CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC SLQSQLNRTCCCWKKKQPENRPPESAANTADCCHTTLSAESVHAVLEETITTRQAELPAP HHHHHHCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC QAAETVLSCGCPCGDSSQSALLNSQGNEGMPFIYRVVIVPPEKSPYPPSPVSTLHSPSSR HHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCC PLLPPPKPV CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA