| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424521
Identifier: 189424521
GI number: 189424521
Start: 1522073
End: 1522972
Strand: Reverse
Name: 189424521
Synonym: Glov_1459
Alternate gene names: NA
Gene position: 1522972-1522073 (Counterclockwise)
Preceding gene: 189424522
Following gene: 189424520
Centisome position: 38.87
GC content: 57.67
Gene sequence:
>900_bases ATGCTGCAGTATGCCTTACAATCCCTTCTGGCACTGACTATTGTCCTGCAACTTGCAACAGCACACGCAGCACCTCCGTC CGGCCAGGCTGCCGCTCCCCGTTCTACAAAGCAAGCGGGACCGCTTGTTGTATTCAGTATCGTGCCGGCGCAGGCAGAAC CGGGCACTCAGATATTGCTGGCCATAAACGGGATCAGTGACGGCCTGAGGCTGGCACTGGGAGGCGATGAGCTTGCCTGG CGGGTGCTGAATGACCGCCGGATCGCCTTTGATATCCCCCGGGATGCTGCACCGGGACAGTATTCACTAACTGTGACCGC CCCGGATGGTGCTTCCCGCTCCTACGCCTTTACGGTACTGCCGCTTAAACCGGTGGCTATCAGCATCGATCCTGACCGGG TTACCTCCTGTACCAGCGGTACAGCCCGCGAAGTAACCGTACAGGGGCGCAACTTCAACGCCTCTTCACAACTGCTGTTT AATGGCGCCATTATTCGCAGCCGTGTCACCTCCCCCGATACCATTAAATTCACAGCCCCCAATGTACGCGATGGTCTGCA TCAGGTTGCGGTCAAAAACGGCGACATCAGCAGCACGCCACTTGGACTTTCCATTGTCACCGCCCCCGACATAAGCTCGA TCACCACCGGCAGCGACCATGTCAACAGCTATGAATTGATCATTGAAGGCGACAACTTCCTGCAGACCAGCAGCCTGATG GTTGACGGGGTCAGGGTAGAAGGTAACAACAACCAGCAACGGGACCGCCTGATCTACCAGGACTGCACCAGAATGGTCTA CGAGCGGCACCCTTACTCATCATCCCCCAAAGAGCTGCGCATACAGGTGGTGAACCCCGGTGGTGCAACCAGCCGGACCG TGCTGGTGACCGCACCCTAA
Upstream 100 bases:
>100_bases GCAATTTTGAATTTTGGATGCTGAATGCTGAATACAACGGGCATCATCCAACATTCAGAATGTACCATGCAACATTGACA GGTAAACCCGAGGTGACCAT
Downstream 100 bases:
>100_bases CCTCTGGAGGATAGGGCAGACTCCCGGACAGACTGGAGGAAACAACCGTGCATAGCATTTCAGGTATGACCAGACGAGAC AAAACGGTAGCGGCTGTGAT
Product: IPT/TIG domain-containing protein
Products: NA
Alternate protein names: IPT/TIG Domain Protein; Cell Surface Receptor IPT/TIG
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLQYALQSLLALTIVLQLATAHAAPPSGQAAAPRSTKQAGPLVVFSIVPAQAEPGTQILLAINGISDGLRLALGGDELAW RVLNDRRIAFDIPRDAAPGQYSLTVTAPDGASRSYAFTVLPLKPVAISIDPDRVTSCTSGTAREVTVQGRNFNASSQLLF NGAIIRSRVTSPDTIKFTAPNVRDGLHQVAVKNGDISSTPLGLSIVTAPDISSITTGSDHVNSYELIIEGDNFLQTSSLM VDGVRVEGNNNQQRDRLIYQDCTRMVYERHPYSSSPKELRIQVVNPGGATSRTVLVTAP
Sequences:
>Translated_299_residues MLQYALQSLLALTIVLQLATAHAAPPSGQAAAPRSTKQAGPLVVFSIVPAQAEPGTQILLAINGISDGLRLALGGDELAW RVLNDRRIAFDIPRDAAPGQYSLTVTAPDGASRSYAFTVLPLKPVAISIDPDRVTSCTSGTAREVTVQGRNFNASSQLLF NGAIIRSRVTSPDTIKFTAPNVRDGLHQVAVKNGDISSTPLGLSIVTAPDISSITTGSDHVNSYELIIEGDNFLQTSSLM VDGVRVEGNNNQQRDRLIYQDCTRMVYERHPYSSSPKELRIQVVNPGGATSRTVLVTAP >Mature_299_residues MLQYALQSLLALTIVLQLATAHAAPPSGQAAAPRSTKQAGPLVVFSIVPAQAEPGTQILLAINGISDGLRLALGGDELAW RVLNDRRIAFDIPRDAAPGQYSLTVTAPDGASRSYAFTVLPLKPVAISIDPDRVTSCTSGTAREVTVQGRNFNASSQLLF NGAIIRSRVTSPDTIKFTAPNVRDGLHQVAVKNGDISSTPLGLSIVTAPDISSITTGSDHVNSYELIIEGDNFLQTSSLM VDGVRVEGNNNQQRDRLIYQDCTRMVYERHPYSSSPKELRIQVVNPGGATSRTVLVTAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31872; Mature: 31872
Theoretical pI: Translated: 7.57; Mature: 7.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQYALQSLLALTIVLQLATAHAAPPSGQAAAPRSTKQAGPLVVFSIVPAQAEPGTQILL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE AINGISDGLRLALGGDELAWRVLNDRRIAFDIPRDAAPGQYSLTVTAPDGASRSYAFTVL EEECCCCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEE PLKPVAISIDPDRVTSCTSGTAREVTVQGRNFNASSQLLFNGAIIRSRVTSPDTIKFTAP EECEEEEEECHHHCCCCCCCCCEEEEEECCCCCCCCEEEEECEEEEEECCCCCEEEEECC NVRDGLHQVAVKNGDISSTPLGLSIVTAPDISSITTGSDHVNSYELIIEGDNFLQTSSLM CHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEECCEE VDGVRVEGNNNQQRDRLIYQDCTRMVYERHPYSSSPKELRIQVVNPGGATSRTVLVTAP EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure MLQYALQSLLALTIVLQLATAHAAPPSGQAAAPRSTKQAGPLVVFSIVPAQAEPGTQILL CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEE AINGISDGLRLALGGDELAWRVLNDRRIAFDIPRDAAPGQYSLTVTAPDGASRSYAFTVL EEECCCCCEEEEECCCCEEEEEECCCEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEEE PLKPVAISIDPDRVTSCTSGTAREVTVQGRNFNASSQLLFNGAIIRSRVTSPDTIKFTAP EECEEEEEECHHHCCCCCCCCCEEEEEECCCCCCCCEEEEECEEEEEECCCCCEEEEECC NVRDGLHQVAVKNGDISSTPLGLSIVTAPDISSITTGSDHVNSYELIIEGDNFLQTSSLM CHHHHHHHHEEECCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCEEEECCEE VDGVRVEGNNNQQRDRLIYQDCTRMVYERHPYSSSPKELRIQVVNPGGATSRTVLVTAP EEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA