| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424363
Identifier: 189424363
GI number: 189424363
Start: 1346494
End: 1347081
Strand: Reverse
Name: 189424363
Synonym: Glov_1299
Alternate gene names: NA
Gene position: 1347081-1346494 (Counterclockwise)
Preceding gene: 189424365
Following gene: 189424362
Centisome position: 34.38
GC content: 44.9
Gene sequence:
>588_bases ATGGAGTTAAAAAGATATTTGATTTTTGCTGTATTGTTGATTTCGTTATTCACATTTAGTGGCTGTGGAGAAGATAAAAC AATATACGAAACTGATACTAACACTGGTGGTACAACTCAAAAATCTTTCACGTTTACAAGCCAAACTGATGTAGCACCAT CTTCTACAGTAACTTCCAACTCAATTACCGTTAGTGGCGTTACCGGTGCTGTGCCTATCAGTGTTACAGGCGGCAGCTAC TCCATCGGAGACGCAGAATTTACCACTACTGCCGGCACGGTAAGTACAGGGCAATCTGTACGGGTACGGCATACCGCTTC GGCTTTAAACGGCACAACCACAACCACAACATTAACTATTGGCAACGTATCAGGCACATTTAAGAGCACAACCAGCGGTG GCAGTGGCGTGTTGGACGGAGAGGCACAATACAAAAAAAGCTGCGGCACTTCAACATGCCATGGTGTACCCACACGCATA CCAGCGGCATTCAGAAATGTAACGGCGTTCAAGAATTACGGCATGACTTTTGGTTTGGACGATACACAGTTACAGAAAAT TGCAGACTATCTGGCAACCCAACCGTAA
Upstream 100 bases:
>100_bases ACACGGAAGGAGGCAGCTAGGTAATGGACCTACATCAGTACATTTGAAGCTACTAAACACAAATTAGCAACAAAAAATCA CAGAAAGGATTTAACGAGAG
Downstream 100 bases:
>100_bases CAGATGAATCAATATGTTTTTAATACATGTAAGGCCATAGAAAGGGACTATCTATATGAGTAAACAAGGCACACAAAAAA CAAAAGAAGATATGTCACGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MELKRYLIFAVLLISLFTFSGCGEDKTIYETDTNTGGTTQKSFTFTSQTDVAPSSTVTSNSITVSGVTGAVPISVTGGSY SIGDAEFTTTAGTVSTGQSVRVRHTASALNGTTTTTTLTIGNVSGTFKSTTSGGSGVLDGEAQYKKSCGTSTCHGVPTRI PAAFRNVTAFKNYGMTFGLDDTQLQKIADYLATQP
Sequences:
>Translated_195_residues MELKRYLIFAVLLISLFTFSGCGEDKTIYETDTNTGGTTQKSFTFTSQTDVAPSSTVTSNSITVSGVTGAVPISVTGGSY SIGDAEFTTTAGTVSTGQSVRVRHTASALNGTTTTTTLTIGNVSGTFKSTTSGGSGVLDGEAQYKKSCGTSTCHGVPTRI PAAFRNVTAFKNYGMTFGLDDTQLQKIADYLATQP >Mature_195_residues MELKRYLIFAVLLISLFTFSGCGEDKTIYETDTNTGGTTQKSFTFTSQTDVAPSSTVTSNSITVSGVTGAVPISVTGGSY SIGDAEFTTTAGTVSTGQSVRVRHTASALNGTTTTTTLTIGNVSGTFKSTTSGGSGVLDGEAQYKKSCGTSTCHGVPTRI PAAFRNVTAFKNYGMTFGLDDTQLQKIADYLATQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20256; Mature: 20256
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELKRYLIFAVLLISLFTFSGCGEDKTIYETDTNTGGTTQKSFTFTSQTDVAPSSTVTSN CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC SITVSGVTGAVPISVTGGSYSIGDAEFTTTAGTVSTGQSVRVRHTASALNGTTTTTTLTI CEEEECCCCEEEEEECCCCEECCCCEEEECCCCCCCCCEEEEEEHHHHCCCCCEEEEEEE GNVSGTFKSTTSGGSGVLDGEAQYKKSCGTSTCHGVPTRIPAAFRNVTAFKNYGMTFGLD ECCCCCEECCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCC DTQLQKIADYLATQP HHHHHHHHHHHHCCC >Mature Secondary Structure MELKRYLIFAVLLISLFTFSGCGEDKTIYETDTNTGGTTQKSFTFTSQTDVAPSSTVTSN CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC SITVSGVTGAVPISVTGGSYSIGDAEFTTTAGTVSTGQSVRVRHTASALNGTTTTTTLTI CEEEECCCCEEEEEECCCCEECCCCEEEECCCCCCCCCEEEEEEHHHHCCCCCEEEEEEE GNVSGTFKSTTSGGSGVLDGEAQYKKSCGTSTCHGVPTRIPAAFRNVTAFKNYGMTFGLD ECCCCCEECCCCCCCEEECCCHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCEEECCC DTQLQKIADYLATQP HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA