| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424361
Identifier: 189424361
GI number: 189424361
Start: 1343618
End: 1344292
Strand: Reverse
Name: 189424361
Synonym: Glov_1296
Alternate gene names: NA
Gene position: 1344292-1343618 (Counterclockwise)
Preceding gene: 189424362
Following gene: 189424360
Centisome position: 34.31
GC content: 47.7
Gene sequence:
>675_bases GTGAATGAAAAGCTATCCCGGAAAACTTTTTTGAAGGCAAGCGCTATCGGCACAATAGGCGTTGCGACTATGGGGCTTGC CGCATGTGCTAGTTCGGATGCCGCAGAAACAAGCACATCGGAAACGGATATTTTGCAGCTACAAGACAGATTATGGGTTT TGGAGGCAAAAGAAGAGATACGTTACAAACTATGTTTATATTGTCGCGGTGATGACAGGCAGGATGCCGAAGAAGGCAAA AAAATGTTTGCAGAAGACTCTTATGTTGATTTTGGAACAAACCCCGATACGGGTCCCGTTTTTAAAGGAACCGGTTGGGA CTGGGTTGATAAGTGCGTGAATGTTACCGACAAGGGGATAACGGCTGCGGGCGGATTCTACGCTCACTTCATGGGTAATA TTGCAATTACCGTCAACGGGAAAAAAGCGGGGTCGGAAACATATGTTACGGCTCCGGTAATGTTTCCGAACGGGGATGGC ACATATACTCTAATACAAGGCGTCGCTCGCTATTGCGACAAGTGGGAGTATCGCAATGGGGAGTGGCTAGTAATCGAACG GCATGTCACCAATGATTATGGATATTACTTGCAATCGTCCGCTCTTTTAAAACCATACGACGGGTCGTTCGACAAGAACG ACCCGTCGTATGCGGCCCTTGCTTACGGCAAGTGA
Upstream 100 bases:
>100_bases TACACAAACGGCATCATGCTGCTTTTTCTCAAAATTCATGGGCTTTTGCAGACCACAAATCTATTCAACGTCAGGAGACT TACTGAAGGAGGATTTAAAG
Downstream 100 bases:
>100_bases TTACGCATCTCAATCAAGTATGAGACAGACCTTCCGGACTGTTGCCCGCCCTTAATTGCAGGACAGGCAACGTCCCACCG GCCATGGTAGCCTGGACCGA
Product: gamma-BHC dehydrochlorinase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MNEKLSRKTFLKASAIGTIGVATMGLAACASSDAAETSTSETDILQLQDRLWVLEAKEEIRYKLCLYCRGDDRQDAEEGK KMFAEDSYVDFGTNPDTGPVFKGTGWDWVDKCVNVTDKGITAAGGFYAHFMGNIAITVNGKKAGSETYVTAPVMFPNGDG TYTLIQGVARYCDKWEYRNGEWLVIERHVTNDYGYYLQSSALLKPYDGSFDKNDPSYAALAYGK
Sequences:
>Translated_224_residues MNEKLSRKTFLKASAIGTIGVATMGLAACASSDAAETSTSETDILQLQDRLWVLEAKEEIRYKLCLYCRGDDRQDAEEGK KMFAEDSYVDFGTNPDTGPVFKGTGWDWVDKCVNVTDKGITAAGGFYAHFMGNIAITVNGKKAGSETYVTAPVMFPNGDG TYTLIQGVARYCDKWEYRNGEWLVIERHVTNDYGYYLQSSALLKPYDGSFDKNDPSYAALAYGK >Mature_224_residues MNEKLSRKTFLKASAIGTIGVATMGLAACASSDAAETSTSETDILQLQDRLWVLEAKEEIRYKLCLYCRGDDRQDAEEGK KMFAEDSYVDFGTNPDTGPVFKGTGWDWVDKCVNVTDKGITAAGGFYAHFMGNIAITVNGKKAGSETYVTAPVMFPNGDG TYTLIQGVARYCDKWEYRNGEWLVIERHVTNDYGYYLQSSALLKPYDGSFDKNDPSYAALAYGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24745; Mature: 24745
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEKLSRKTFLKASAIGTIGVATMGLAACASSDAAETSTSETDILQLQDRLWVLEAKEEI CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEECHHCC RYKLCLYCRGDDRQDAEEGKKMFAEDSYVDFGTNPDTGPVFKGTGWDWVDKCVNVTDKGI EEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCEECCCCHHHHHHHHCCCCCCE TAAGGFYAHFMGNIAITVNGKKAGSETYVTAPVMFPNGDGTYTLIQGVARYCDKWEYRNG EECCCCEEEECCCEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC EWLVIERHVTNDYGYYLQSSALLKPYDGSFDKNDPSYAALAYGK CEEEEEEEECCCCCEEEECCCEECCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MNEKLSRKTFLKASAIGTIGVATMGLAACASSDAAETSTSETDILQLQDRLWVLEAKEEI CCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEEEECHHCC RYKLCLYCRGDDRQDAEEGKKMFAEDSYVDFGTNPDTGPVFKGTGWDWVDKCVNVTDKGI EEEEEEEEECCCCCCHHHHHHHHCCCCEEECCCCCCCCCEECCCCHHHHHHHHCCCCCCE TAAGGFYAHFMGNIAITVNGKKAGSETYVTAPVMFPNGDGTYTLIQGVARYCDKWEYRNG EECCCCEEEECCCEEEEECCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCC EWLVIERHVTNDYGYYLQSSALLKPYDGSFDKNDPSYAALAYGK CEEEEEEEECCCCCEEEECCCEECCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA