| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is ygcG [H]
Identifier: 189424320
GI number: 189424320
Start: 1303390
End: 1304298
Strand: Reverse
Name: ygcG [H]
Synonym: Glov_1255
Alternate gene names: 189424320
Gene position: 1304298-1303390 (Counterclockwise)
Preceding gene: 189424321
Following gene: 189424319
Centisome position: 33.29
GC content: 57.43
Gene sequence:
>909_bases ATGCGTTTTAATGCCTTCAAACTGCTTCTGCTGTTCATCATAACGTTCGTCTGTCCGGCACAGCATGTTTCAGCGCTTGA AGCTCCGCCGTTAAAGGGCAGAATCAATGATTATGCCGGGATGCTCTCTCCTGCAACCGCCCGGTCACTGGAACAAAAAC TGGCTGCCTTTGAAAACGAAACCACCAATCAGGTGGTGTTGCTGACGATTCCGTCCCTTGAAGGTGACGTCATCGAAAGC TACGCCATCCGGGTGGCCGAGGCCTGGAAAATTGGACAGAAAGACAAAAGCAACGGGGTGATCCTGATTCTTGCCAAGAA GGAGCGTAAGATCAGAATCGAGGTCGGCACCGGACTGCAGGGGGTCCTGCCGGACATCACCGCCGGCCAGATTATCCGCA ATGTGATCGCGCCGGAACTGCGGGCCGGCAACATAGACCAGGGGATCAGTGCCGGTCTCGGTGCAATTATCGGTGCCACC AAGGGGGAGTTCAAGGCCACAGCAGCTGACAAGAAAGCGGCCAAAAAGAAAAAGGGCAGCGGCTACGGCCTCTTCATTAT CCTGCTGCTGGCGGCCATCGTCATAACTGCTGTTGCCGGCTCATCCTCCCGCACTGCCGGTATTCTGGCAGGTGGTGTGA GTCTGCCGGCTGCCGCAGGTATCGGCCTGGGAGCGGTACTCTGGAAGCTGGGAGTACTGGCACTTTTGGGCGCTGCAGCC GGATTTCTGATCAGTCTCCTGATGCGGCTCTTTCATGCCGGTGGTGGTGGCGGCGGATCCTACGGTGGTGGTTGGGGAGG GCCGACCATCTTCTATGGTGGCGGAGGCGGTGGCTCATCGTCCAGTGACGATAGCTTTTCCGGAGGTGGCGGAGACTTTG ACGGTGGCGGTTCTTCAGACGACTGGTAA
Upstream 100 bases:
>100_bases ACTCTTGCTTCACCTGAAACGCAAAGAACCTTTCAAGGCTGAGGAAGGTGCCAAAACGGCCCCCAAGGTCAAATTCTAAC CGGAGTCCCACGAGGCCAGC
Downstream 100 bases:
>100_bases CTTGCGGTGTCGTTTTTTTCTGGTATGCTGACGCTCTATTCCCCAAGCCAAAGGACTAAGCCAGTGCGTTTTATCCTATT AATCCTCAGCTGTCTTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MRFNAFKLLLLFIITFVCPAQHVSALEAPPLKGRINDYAGMLSPATARSLEQKLAAFENETTNQVVLLTIPSLEGDVIES YAIRVAEAWKIGQKDKSNGVILILAKKERKIRIEVGTGLQGVLPDITAGQIIRNVIAPELRAGNIDQGISAGLGAIIGAT KGEFKATAADKKAAKKKKGSGYGLFIILLLAAIVITAVAGSSSRTAGILAGGVSLPAAAGIGLGAVLWKLGVLALLGAAA GFLISLLMRLFHAGGGGGGSYGGGWGGPTIFYGGGGGGSSSSDDSFSGGGGDFDGGGSSDDW
Sequences:
>Translated_302_residues MRFNAFKLLLLFIITFVCPAQHVSALEAPPLKGRINDYAGMLSPATARSLEQKLAAFENETTNQVVLLTIPSLEGDVIES YAIRVAEAWKIGQKDKSNGVILILAKKERKIRIEVGTGLQGVLPDITAGQIIRNVIAPELRAGNIDQGISAGLGAIIGAT KGEFKATAADKKAAKKKKGSGYGLFIILLLAAIVITAVAGSSSRTAGILAGGVSLPAAAGIGLGAVLWKLGVLALLGAAA GFLISLLMRLFHAGGGGGGSYGGGWGGPTIFYGGGGGGSSSSDDSFSGGGGDFDGGGSSDDW >Mature_302_residues MRFNAFKLLLLFIITFVCPAQHVSALEAPPLKGRINDYAGMLSPATARSLEQKLAAFENETTNQVVLLTIPSLEGDVIES YAIRVAEAWKIGQKDKSNGVILILAKKERKIRIEVGTGLQGVLPDITAGQIIRNVIAPELRAGNIDQGISAGLGAIIGAT KGEFKATAADKKAAKKKKGSGYGLFIILLLAAIVITAVAGSSSRTAGILAGGVSLPAAAGIGLGAVLWKLGVLALLGAAA GFLISLLMRLFHAGGGGGGSYGGGWGGPTIFYGGGGGGSSSSDDSFSGGGGDFDGGGSSDDW
Specific function: Unknown
COG id: COG1512
COG function: function code R; Beta-propeller domains of methanol dehydrogenase type
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0603 family [H]
Homologues:
Organism=Escherichia coli, GI87082161, Length=156, Percent_Identity=29.4871794871795, Blast_Score=93, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007621 [H]
Pfam domain/function: PF04536 DUF477 [H]
EC number: NA
Molecular weight: Translated: 30614; Mature: 30614
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00290 IG_MHC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFNAFKLLLLFIITFVCPAQHVSALEAPPLKGRINDYAGMLSPATARSLEQKLAAFENE CCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC TTNQVVLLTIPSLEGDVIESYAIRVAEAWKIGQKDKSNGVILILAKKERKIRIEVGTGLQ CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCC GVLPDITAGQIIRNVIAPELRAGNIDQGISAGLGAIIGATKGEFKATAADKKAAKKKKGS CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCC GYGLFIILLLAAIVITAVAGSSSRTAGILAGGVSLPAAAGIGLGAVLWKLGVLALLGAAA CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHH GFLISLLMRLFHAGGGGGGSYGGGWGGPTIFYGGGGGGSSSSDDSFSGGGGDFDGGGSSD HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC DW CC >Mature Secondary Structure MRFNAFKLLLLFIITFVCPAQHVSALEAPPLKGRINDYAGMLSPATARSLEQKLAAFENE CCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCC TTNQVVLLTIPSLEGDVIESYAIRVAEAWKIGQKDKSNGVILILAKKERKIRIEVGTGLQ CCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCC GVLPDITAGQIIRNVIAPELRAGNIDQGISAGLGAIIGATKGEFKATAADKKAAKKKKGS CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHCCC GYGLFIILLLAAIVITAVAGSSSRTAGILAGGVSLPAAAGIGLGAVLWKLGVLALLGAAA CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHH GFLISLLMRLFHAGGGGGGSYGGGWGGPTIFYGGGGGGSSSSDDSFSGGGGDFDGGGSSD HHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC DW CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]