| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424319
Identifier: 189424319
GI number: 189424319
Start: 1302508
End: 1303326
Strand: Reverse
Name: 189424319
Synonym: Glov_1254
Alternate gene names: NA
Gene position: 1303326-1302508 (Counterclockwise)
Preceding gene: 189424320
Following gene: 189424318
Centisome position: 33.27
GC content: 54.7
Gene sequence:
>819_bases GTGCGTTTTATCCTATTAATCCTCAGCTGTCTTGCTCTCATGCTTGCCTCGGCAGCCGCCCTAGCTGCTCAAAAGCCTGC TGACGGTGAGCGTCTGCTCTTGATTCGCGCCGTTGGCGGCAGCGCATCCGAGAAGGAACTGGCAGCCCAAGCAGGTGTCT ATGACAGCATGGTAGAATACCTGACTGACCGGGGCTACCGGGTGGTAGACCGTGCGGCCGCAGAAAAAGCGGCCATGCAG ATTGCTGCCACCCATGAGATTGACCCTGTCCTGAACAAAGCTGCTTCCTATGGCCTTACCTTTCTGGCCGAATATTCCAT CCATTTCAAGACATCTACTATTGTCAAAGACCCGGACAAAGGGATTGGTGCTCTGGTCAAAGTCAGTGCCAAGATCATTG ACAACACAGGTGCACGGATTATCTCGGCCAAACAGGCTGAGGCATCATCAAGTGGGCACAGCACTGAAGATGCCATTGAA AAGGCAGCCAGAAACGCGGGCAAAAAGCTGACCGAACAACTGTCCAAAGGCCTGGAGCAGCATATTACCCAGAACGGCAA TGAAGGCCGCACCGTCACCATGGTCTTTGAAGGCCGGGAGGCCCAGACCGAACGACTGGTGTCCCTGTTGGAAAAAAACA AGGCTGTCGCTGCCGTCAAGGAGGTCGAGGCCGGCGGTGGCAAAGCCACGCTGGAAATCATCTGTAAATCACGGCGCGAC CAGCTTGAACGAGAGCTGCTCAGACTGGCCTCCCAGCAGGGGATACAGCTGCAGAAGATCAGATCAGAAGGTAACCGCAG CACATGGAAAATCAGATAG
Upstream 100 bases:
>100_bases AGACTTTGACGGTGGCGGTTCTTCAGACGACTGGTAACTTGCGGTGTCGTTTTTTTCTGGTATGCTGACGCTCTATTCCC CAAGCCAAAGGACTAAGCCA
Downstream 100 bases:
>100_bases GAGGAAGAAAACATGAGACGAATTTTGCTACTGGTTGTCGGGGTAATGCTCCTCAGTGCAACGGCAGCCTTCGCTGCAGC CGTAACAGCCACCGGTGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MRFILLILSCLALMLASAAALAAQKPADGERLLLIRAVGGSASEKELAAQAGVYDSMVEYLTDRGYRVVDRAAAEKAAMQ IAATHEIDPVLNKAASYGLTFLAEYSIHFKTSTIVKDPDKGIGALVKVSAKIIDNTGARIISAKQAEASSSGHSTEDAIE KAARNAGKKLTEQLSKGLEQHITQNGNEGRTVTMVFEGREAQTERLVSLLEKNKAVAAVKEVEAGGGKATLEIICKSRRD QLERELLRLASQQGIQLQKIRSEGNRSTWKIR
Sequences:
>Translated_272_residues MRFILLILSCLALMLASAAALAAQKPADGERLLLIRAVGGSASEKELAAQAGVYDSMVEYLTDRGYRVVDRAAAEKAAMQ IAATHEIDPVLNKAASYGLTFLAEYSIHFKTSTIVKDPDKGIGALVKVSAKIIDNTGARIISAKQAEASSSGHSTEDAIE KAARNAGKKLTEQLSKGLEQHITQNGNEGRTVTMVFEGREAQTERLVSLLEKNKAVAAVKEVEAGGGKATLEIICKSRRD QLERELLRLASQQGIQLQKIRSEGNRSTWKIR >Mature_272_residues MRFILLILSCLALMLASAAALAAQKPADGERLLLIRAVGGSASEKELAAQAGVYDSMVEYLTDRGYRVVDRAAAEKAAMQ IAATHEIDPVLNKAASYGLTFLAEYSIHFKTSTIVKDPDKGIGALVKVSAKIIDNTGARIISAKQAEASSSGHSTEDAIE KAARNAGKKLTEQLSKGLEQHITQNGNEGRTVTMVFEGREAQTERLVSLLEKNKAVAAVKEVEAGGGKATLEIICKSRRD QLERELLRLASQQGIQLQKIRSEGNRSTWKIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29346; Mature: 29346
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFILLILSCLALMLASAAALAAQKPADGERLLLIRAVGGSASEKELAAQAGVYDSMVEY CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCHHHHHHHH LTDRGYRVVDRAAAEKAAMQIAATHEIDPVLNKAASYGLTFLAEYSIHFKTSTIVKDPDK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEEEEEEEECCCCC GIGALVKVSAKIIDNTGARIISAKQAEASSSGHSTEDAIEKAARNAGKKLTEQLSKGLEQ CHHHHHHHHHHHHCCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HITQNGNEGRTVTMVFEGREAQTERLVSLLEKNKAVAAVKEVEAGGGKATLEIICKSRRD HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHH QLERELLRLASQQGIQLQKIRSEGNRSTWKIR HHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEC >Mature Secondary Structure MRFILLILSCLALMLASAAALAAQKPADGERLLLIRAVGGSASEKELAAQAGVYDSMVEY CHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHCHHHHHHHH LTDRGYRVVDRAAAEKAAMQIAATHEIDPVLNKAASYGLTFLAEYSIHFKTSTIVKDPDK HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHEEEEEEEEEEEEEEECCCCC GIGALVKVSAKIIDNTGARIISAKQAEASSSGHSTEDAIEKAARNAGKKLTEQLSKGLEQ CHHHHHHHHHHHHCCCCCCEEECHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH HITQNGNEGRTVTMVFEGREAQTERLVSLLEKNKAVAAVKEVEAGGGKATLEIICKSRRD HHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHH QLERELLRLASQQGIQLQKIRSEGNRSTWKIR HHHHHHHHHHHHCCCHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA