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The map label for this gene is yfhP [C]

Identifier: 189424306

GI number: 189424306

Start: 1289816

End: 1290220

Strand: Reverse

Name: yfhP [C]

Synonym: Glov_1241

Alternate gene names: 189424306

Gene position: 1290220-1289816 (Counterclockwise)

Preceding gene: 189424307

Following gene: 189424305

Centisome position: 32.93

GC content: 54.81

Gene sequence:

>405_bases
ATGATGGAACTGACCCGTAAGGGTGATTACGCAATACGTGGCATCATTTATCTGGCAAGTCAGCCACCCAACAAGATTTC
ACTCCTCAGCGAAATCGCTGTGGCCGTGGATGTCCCCCAGACCTTTCTGGCAAAGATATTTCAGCAGTTCAGCAAAACCG
GCATTGTAAAATCATTCCGCGGTACCGGCGGTGGTTTCCTGCTGGCCGGTCCGCCGGAAAGCATTACCCTTTTGCAGGTG
GTTGAGGCGGTTGAAGGGCCGATCCTGCCGAACCGTTGCGTCCTGAAACCGGGTGAGTGTGAACGCGATGCCTCCTGCAC
CGTCCATCCTGTCTGGCGTCAGGTGCAGCAGCAGGTACGCAGCATCCTGGCAGGCATTACCCTGAAAGATCTTGCAACGC
TATAA

Upstream 100 bases:

>100_bases
AAGGAATCAACGGGGATCATACCGGGAAGGCAACAGGACTTGACAAGTCTTTTGCCACCACGGTATAAAGGGATCATCAA
AGTCCTTTTAGGAGTCCCCT

Downstream 100 bases:

>100_bases
CATGCTGTATTTGCAAGACTTTACTTGTTTTTGATTGACATGCAGCAGAAGCTCTGATAGAAGACGACCACAATTAAACC
TGAGGGTTCAGCTTAAAGTC

Product: BadM/Rrf2 family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MMELTRKGDYAIRGIIYLASQPPNKISLLSEIAVAVDVPQTFLAKIFQQFSKTGIVKSFRGTGGGFLLAGPPESITLLQV
VEAVEGPILPNRCVLKPGECERDASCTVHPVWRQVQQQVRSILAGITLKDLATL

Sequences:

>Translated_134_residues
MMELTRKGDYAIRGIIYLASQPPNKISLLSEIAVAVDVPQTFLAKIFQQFSKTGIVKSFRGTGGGFLLAGPPESITLLQV
VEAVEGPILPNRCVLKPGECERDASCTVHPVWRQVQQQVRSILAGITLKDLATL
>Mature_134_residues
MMELTRKGDYAIRGIIYLASQPPNKISLLSEIAVAVDVPQTFLAKIFQQFSKTGIVKSFRGTGGGFLLAGPPESITLLQV
VEAVEGPILPNRCVLKPGECERDASCTVHPVWRQVQQQVRSILAGITLKDLATL

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=130, Percent_Identity=31.5384615384615, Blast_Score=67, Evalue=6e-13,
Organism=Escherichia coli, GI1790621, Length=130, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000944 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 14561; Mature: 14561

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMELTRKGDYAIRGIIYLASQPPNKISLLSEIAVAVDVPQTFLAKIFQQFSKTGIVKSFR
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCC
GTGGGFLLAGPPESITLLQVVEAVEGPILPNRCVLKPGECERDASCTVHPVWRQVQQQVR
CCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
SILAGITLKDLATL
HHHHCCCHHHHHCC
>Mature Secondary Structure
MMELTRKGDYAIRGIIYLASQPPNKISLLSEIAVAVDVPQTFLAKIFQQFSKTGIVKSFR
CCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHCC
GTGGGFLLAGPPESITLLQVVEAVEGPILPNRCVLKPGECERDASCTVHPVWRQVQQQVR
CCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHH
SILAGITLKDLATL
HHHHCCCHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]