| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424177
Identifier: 189424177
GI number: 189424177
Start: 1163728
End: 1164546
Strand: Reverse
Name: 189424177
Synonym: Glov_1112
Alternate gene names: NA
Gene position: 1164546-1163728 (Counterclockwise)
Preceding gene: 189424178
Following gene: 189424176
Centisome position: 29.72
GC content: 57.14
Gene sequence:
>819_bases ATGAACGGTCCCGACTTTTTACAACAGCATACCGACCGCCTGAAAAGCCGTATGGGAGCCTGCTTCCCCGGTGAACGTGC CGTGTTCCGCGGCCACGACCTCCATGCCGAACTGAGAGACATGGATTGGGTTGAGCTCTTTGTCTTCGGCATCACCGGCC GTCGCTTCACCCCTCAGCAGTTACGCCTGCTGCACGCTATCTGGGTCTATACCAGCTACCCGGACGCCCGTATCTGGAAC AACCGGGTTGCGGCACTGGCAGGCAGCTCCCGCAGCACGCCAACACTTGCGCTTGCTGCCTCACTTGCCGTATCCGAAGC CACGGTTTATGGCGGATATCCTTCTATCAGCGCCTTTGATTTTTTTATGCGGACCAGAAAGAAGATTGCACAAGGCGAGC ACGTAGAGGAGATTATTCATAGTGAGCGGCAGACACGGCGCATATACGGCTATGGACGTCCGATTACGTCAGCAGACGAA CGTCTTCCCTGGCTTCTTGACTGCGCCCGCGAACTATGCCTGGACCAGGGGCCCTATCTGCGGCTTGCCTTTGATGTAGA ACGCGTGTTGCTGAAGGACAACCCGCTACTGCGGATGAATTATGCAGGCTTGGTAGCGGCGTTGTCACTTGACCTGGGGT TTTCGGCCAGGGAGTTTCACCTGTTCAGATTCCCCATGACGTTTGCCGGCATGCCCCCCTGCTTCCTCGAAAGTTCGCAG GAAACCGAAGGCGCTTTTTTACCCTTGTCCTGCGCCCACATCGTGTACGAAGGCACACCAAAGCGCTCATGGCAATCCAG GACCGCCCGACCGGCATAG
Upstream 100 bases:
>100_bases CCGGGGCAGCGGTCCATGCACTGGAACAAAAACAGCTTGGCTACAAAAAATTTCCGTTCTTTTCCATTGAGCTGGAGAAT GACCCGGCCGGAGGCAGCCC
Downstream 100 bases:
>100_bases CACCGATCCCGGCTCATCCCACCGGGCGACACGCATCCCCTGCCCAACCGAAATCAAGAAGGTACTGACCCATGCTCACC TACACCATTACTGCTGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNGPDFLQQHTDRLKSRMGACFPGERAVFRGHDLHAELRDMDWVELFVFGITGRRFTPQQLRLLHAIWVYTSYPDARIWN NRVAALAGSSRSTPTLALAASLAVSEATVYGGYPSISAFDFFMRTRKKIAQGEHVEEIIHSERQTRRIYGYGRPITSADE RLPWLLDCARELCLDQGPYLRLAFDVERVLLKDNPLLRMNYAGLVAALSLDLGFSAREFHLFRFPMTFAGMPPCFLESSQ ETEGAFLPLSCAHIVYEGTPKRSWQSRTARPA
Sequences:
>Translated_272_residues MNGPDFLQQHTDRLKSRMGACFPGERAVFRGHDLHAELRDMDWVELFVFGITGRRFTPQQLRLLHAIWVYTSYPDARIWN NRVAALAGSSRSTPTLALAASLAVSEATVYGGYPSISAFDFFMRTRKKIAQGEHVEEIIHSERQTRRIYGYGRPITSADE RLPWLLDCARELCLDQGPYLRLAFDVERVLLKDNPLLRMNYAGLVAALSLDLGFSAREFHLFRFPMTFAGMPPCFLESSQ ETEGAFLPLSCAHIVYEGTPKRSWQSRTARPA >Mature_272_residues MNGPDFLQQHTDRLKSRMGACFPGERAVFRGHDLHAELRDMDWVELFVFGITGRRFTPQQLRLLHAIWVYTSYPDARIWN NRVAALAGSSRSTPTLALAASLAVSEATVYGGYPSISAFDFFMRTRKKIAQGEHVEEIIHSERQTRRIYGYGRPITSADE RLPWLLDCARELCLDQGPYLRLAFDVERVLLKDNPLLRMNYAGLVAALSLDLGFSAREFHLFRFPMTFAGMPPCFLESSQ ETEGAFLPLSCAHIVYEGTPKRSWQSRTARPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30907; Mature: 30907
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNGPDFLQQHTDRLKSRMGACFPGERAVFRGHDLHAELRDMDWVELFVFGITGRRFTPQQ CCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHCCCEEEEEEEECCCCCCCHHH LRLLHAIWVYTSYPDARIWNNRVAALAGSSRSTPTLALAASLAVSEATVYGGYPSISAFD HHHHHHHHHEECCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCHHHHH FFMRTRKKIAQGEHVEEIIHSERQTRRIYGYGRPITSADERLPWLLDCARELCLDQGPYL HHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCHHHCCCHHHHHHHHHHCCCCCEE RLAFDVERVLLKDNPLLRMNYAGLVAALSLDLGFSAREFHLFRFPMTFAGMPPCFLESSQ EEEEHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCHHHCCCCC ETEGAFLPLSCAHIVYEGTPKRSWQSRTARPA CCCCCEEEEEEEEEEECCCCCCCHHCCCCCCC >Mature Secondary Structure MNGPDFLQQHTDRLKSRMGACFPGERAVFRGHDLHAELRDMDWVELFVFGITGRRFTPQQ CCCHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCHHHHCCCEEEEEEEECCCCCCCHHH LRLLHAIWVYTSYPDARIWNNRVAALAGSSRSTPTLALAASLAVSEATVYGGYPSISAFD HHHHHHHHHEECCCCCHHHCCEEEEEECCCCCCCHHHHHHHHHHHHHEEECCCCCHHHHH FFMRTRKKIAQGEHVEEIIHSERQTRRIYGYGRPITSADERLPWLLDCARELCLDQGPYL HHHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCCHHHCCCHHHHHHHHHHCCCCCEE RLAFDVERVLLKDNPLLRMNYAGLVAALSLDLGFSAREFHLFRFPMTFAGMPPCFLESSQ EEEEHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCCCCEEEEEECCHHHCCCCHHHCCCCC ETEGAFLPLSCAHIVYEGTPKRSWQSRTARPA CCCCCEEEEEEEEEEECCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA