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The map label for this gene is yuxH [H]

Identifier: 189424139

GI number: 189424139

Start: 1119217

End: 1120503

Strand: Reverse

Name: yuxH [H]

Synonym: Glov_1073

Alternate gene names: 189424139

Gene position: 1120503-1119217 (Counterclockwise)

Preceding gene: 189424140

Following gene: 189424138

Centisome position: 28.6

GC content: 56.33

Gene sequence:

>1287_bases
ATGAATTCCAGATCTGACCATCAGGCAAACCGGCAACATGACCGCAGCTACTTTATCGGCCGTCAGCCGATTCTGAACCG
CAAGCAGGAGATCATCGGCTACGAGCTGCTTTTCAGGGCTGCCGGAGATCATCAGGCCGCACTCTACAATGACCAGGCCC
AGGCCTCGGCCTCGGTGATTGCCAGCGCCCTTTCCGATTTCGGTCTGCAGGATATCCTTGGCGACAAGTACGGGTTTCTC
AATATCACCTCCGCCATGCTGAGTTCAGAGGTGCTGGAACTGCTGCCGGTCGAGCAGTCGGTACTGGAGCTGCTTGAGAA
CGTCGAGCTTGACGAAACGGCCCGTTTGCGTTGTACCAACCTGAAATCGCTCGGTTTCCGTATCGCGCTGGATGACCATA
TCTACCATCCTGACCACGCTGCCTTTTACAACATGGTTGATATTGTCAAGGTGGACACCCTGACCACCGATCCGGCAAAG
TTGCCCGAAATCGCAGCCAGCCTGCGCAGCTACCCGGTACAACTGCTGGCGGAACGGGTTGAAACCGTTGAGATGTTTGA
GCAGTGCCGGGAATGTGGCTTTGAGCTGTTCCAGGGCTATTTTTTCGAGCGTCCGGCCATCATCAGCCGTAAGCGGATAG
ATGCCTCCGGCATCGGCATGCTGAAGTTACTGCAACAGTTGCACGAAGATGCGGACATTAACGCGATTGAAGAGATCTTC
CGGGAAGACCCGGGACTGACCTTTCAGCTGTTAAAGCTGGTCAACTCGGTCATGACCGGCACCCGGGACAAGATCAAGAG
CCTGCGCCATGCCATCATGCTACTGGGGATTATCCAGCTACGACGCTGGATGCAGCTTTCCCTGTTTGCCGGCAAGGACG
AGAGCGGTTTGAATTCACCGCTGCTTGAGATGGCAGCCGTACGGGGGCGTCTGATGGAGCTGCTGGTGTTGCAGGAGTCC
GCAGGACAGCGCAGCACCGAGCTGGCGGAATCGGCCTTCCTGACCGGCATACTTTCATTGCTGGATGCCCTGTATGAGAC
CTCCATGGAACAGATTGTTGAAGGCCTGAACCTGTCGGAGGATCTGGCCGTCGCCCTTTTGCGCCACGAGGGGAGACTCG
GGCAACTGCTGCTTCTGGCAAAGAAGCTGGAACGATCGGAGTTTGCCGCAGTGCAAGAGCTGCTCGCTTCTCTCTCCATC
AGCCTTGATCAGCTGCTTGAGGCCCAACTGGATGCCTTCAGCTGGCGCAGCAGCATTGCAACAAAGAAACCGGGAGAACA
ACTATGA

Upstream 100 bases:

>100_bases
GCATGCCTGCAGAGTTATAGCGGCGCATAGTGCCTTATACGCTGTACCGTCGTCGATCAGTCCGGAATGGTGTATACTGG
GCCGATGACAGGAGTACGCA

Downstream 100 bases:

>100_bases
AACGCTCATGCTATCTTGCTTTTGCGGCTGTGCTTGTAATCTGGTCTCCCTGCCATGCCGGATTGCTAGATGATTTTTCC
CGCGACATCCTGCCTCCGTC

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 428; Mature: 428

Protein sequence:

>428_residues
MNSRSDHQANRQHDRSYFIGRQPILNRKQEIIGYELLFRAAGDHQAALYNDQAQASASVIASALSDFGLQDILGDKYGFL
NITSAMLSSEVLELLPVEQSVLELLENVELDETARLRCTNLKSLGFRIALDDHIYHPDHAAFYNMVDIVKVDTLTTDPAK
LPEIAASLRSYPVQLLAERVETVEMFEQCRECGFELFQGYFFERPAIISRKRIDASGIGMLKLLQQLHEDADINAIEEIF
REDPGLTFQLLKLVNSVMTGTRDKIKSLRHAIMLLGIIQLRRWMQLSLFAGKDESGLNSPLLEMAAVRGRLMELLVLQES
AGQRSTELAESAFLTGILSLLDALYETSMEQIVEGLNLSEDLAVALLRHEGRLGQLLLLAKKLERSEFAAVQELLASLSI
SLDQLLEAQLDAFSWRSSIATKKPGEQL

Sequences:

>Translated_428_residues
MNSRSDHQANRQHDRSYFIGRQPILNRKQEIIGYELLFRAAGDHQAALYNDQAQASASVIASALSDFGLQDILGDKYGFL
NITSAMLSSEVLELLPVEQSVLELLENVELDETARLRCTNLKSLGFRIALDDHIYHPDHAAFYNMVDIVKVDTLTTDPAK
LPEIAASLRSYPVQLLAERVETVEMFEQCRECGFELFQGYFFERPAIISRKRIDASGIGMLKLLQQLHEDADINAIEEIF
REDPGLTFQLLKLVNSVMTGTRDKIKSLRHAIMLLGIIQLRRWMQLSLFAGKDESGLNSPLLEMAAVRGRLMELLVLQES
AGQRSTELAESAFLTGILSLLDALYETSMEQIVEGLNLSEDLAVALLRHEGRLGQLLLLAKKLERSEFAAVQELLASLSI
SLDQLLEAQLDAFSWRSSIATKKPGEQL
>Mature_428_residues
MNSRSDHQANRQHDRSYFIGRQPILNRKQEIIGYELLFRAAGDHQAALYNDQAQASASVIASALSDFGLQDILGDKYGFL
NITSAMLSSEVLELLPVEQSVLELLENVELDETARLRCTNLKSLGFRIALDDHIYHPDHAAFYNMVDIVKVDTLTTDPAK
LPEIAASLRSYPVQLLAERVETVEMFEQCRECGFELFQGYFFERPAIISRKRIDASGIGMLKLLQQLHEDADINAIEEIF
REDPGLTFQLLKLVNSVMTGTRDKIKSLRHAIMLLGIIQLRRWMQLSLFAGKDESGLNSPLLEMAAVRGRLMELLVLQES
AGQRSTELAESAFLTGILSLLDALYETSMEQIVEGLNLSEDLAVALLRHEGRLGQLLLLAKKLERSEFAAVQELLASLSI
SLDQLLEAQLDAFSWRSSIATKKPGEQL

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 47977; Mature: 47977

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRSDHQANRQHDRSYFIGRQPILNRKQEIIGYELLFRAAGDHQAALYNDQAQASASVI
CCCCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
ASALSDFGLQDILGDKYGFLNITSAMLSSEVLELLPVEQSVLELLENVELDETARLRCTN
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHH
LKSLGFRIALDDHIYHPDHAAFYNMVDIVKVDTLTTDPAKLPEIAASLRSYPVQLLAERV
HHHCCEEEEECCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ETVEMFEQCRECGFELFQGYFFERPAIISRKRIDASGIGMLKLLQQLHEDADINAIEEIF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
REDPGLTFQLLKLVNSVMTGTRDKIKSLRHAIMLLGIIQLRRWMQLSLFAGKDESGLNSP
HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
LLEMAAVRGRLMELLVLQESAGQRSTELAESAFLTGILSLLDALYETSMEQIVEGLNLSE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DLAVALLRHEGRLGQLLLLAKKLERSEFAAVQELLASLSISLDQLLEAQLDAFSWRSSIA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKKPGEQL
CCCCCCCC
>Mature Secondary Structure
MNSRSDHQANRQHDRSYFIGRQPILNRKQEIIGYELLFRAAGDHQAALYNDQAQASASVI
CCCCCCCHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHH
ASALSDFGLQDILGDKYGFLNITSAMLSSEVLELLPVEQSVLELLENVELDETARLRCTN
HHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHH
LKSLGFRIALDDHIYHPDHAAFYNMVDIVKVDTLTTDPAKLPEIAASLRSYPVQLLAERV
HHHCCEEEEECCCCCCCCHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHH
ETVEMFEQCRECGFELFQGYFFERPAIISRKRIDASGIGMLKLLQQLHEDADINAIEEIF
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHH
REDPGLTFQLLKLVNSVMTGTRDKIKSLRHAIMLLGIIQLRRWMQLSLFAGKDESGLNSP
HCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCH
LLEMAAVRGRLMELLVLQESAGQRSTELAESAFLTGILSLLDALYETSMEQIVEGLNLSE
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
DLAVALLRHEGRLGQLLLLAKKLERSEFAAVQELLASLSISLDQLLEAQLDAFSWRSSIA
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
TKKPGEQL
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]