| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is bcp [H]
Identifier: 189424119
GI number: 189424119
Start: 1092889
End: 1093362
Strand: Reverse
Name: bcp [H]
Synonym: Glov_1053
Alternate gene names: 189424119
Gene position: 1093362-1092889 (Counterclockwise)
Preceding gene: 189424129
Following gene: 189424118
Centisome position: 27.91
GC content: 51.9
Gene sequence:
>474_bases ATGACCCTTATTGACAATAAAGCCCCTGACTTTGATCTGGAGGGGAGTGACGGCAGACGCCACCGCCTGCAGGACTATGC GGGGCGGCGCCTGTTGCTGTTTTTCTATCCCAGGGACAACACGTCAGGCTGCACCAAGGAGGCCGTCGGCTTCCGTGACC TGAAGCCGGAATTTGAAAAACTGGGCTTTGTCATTCTGGGGATCAGCCGCGACTCGCTGGCTTCACACCAGCGCTTCATT GATAATCATGAACTGAACATGGTGCTGCTGTCTGATCCTGATGCCCGTGTGATGAAGGCTTATCACGCCTTTGGCGAGAA GATGATGTACGGCAAACAGGTTTCCGGAGTAATCCGCTCAACCGTATTGATCTGTGCGGACGGTATCATCAGAAAACATT GGACCAAAGTAGCCAAGGCCGAACAACACCCGGCCCAGGTTCTTGAGTATATTAAAGATTTTCACTGTGAATAA
Upstream 100 bases:
>100_bases CGGTTCTGATGAGCTTTGAGCAGTTGCGAGCCAATGTTGACTTTTTTGATGTATAGTGTATACAGATTCAACCTTGTGTA TTCAGCCTTAAGGAGCAGAC
Downstream 100 bases:
>100_bases GGAGGAGTCGATGAGTTTTATTTCCCTTAAGGAAGTGGTGGACTTTGCGGTTGAACGAGAGGAAACCGCGTATCAGATGT ATAAACGTGCTGCCGAGCTG
Product: alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen
Products: NA
Alternate protein names: Bacterioferritin comigratory protein homolog; Thioredoxin reductase [H]
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTLIDNKAPDFDLEGSDGRRHRLQDYAGRRLLLFFYPRDNTSGCTKEAVGFRDLKPEFEKLGFVILGISRDSLASHQRFI DNHELNMVLLSDPDARVMKAYHAFGEKMMYGKQVSGVIRSTVLICADGIIRKHWTKVAKAEQHPAQVLEYIKDFHCE
Sequences:
>Translated_157_residues MTLIDNKAPDFDLEGSDGRRHRLQDYAGRRLLLFFYPRDNTSGCTKEAVGFRDLKPEFEKLGFVILGISRDSLASHQRFI DNHELNMVLLSDPDARVMKAYHAFGEKMMYGKQVSGVIRSTVLICADGIIRKHWTKVAKAEQHPAQVLEYIKDFHCE >Mature_156_residues TLIDNKAPDFDLEGSDGRRHRLQDYAGRRLLLFFYPRDNTSGCTKEAVGFRDLKPEFEKLGFVILGISRDSLASHQRFID NHELNMVLLSDPDARVMKAYHAFGEKMMYGKQVSGVIRSTVLICADGIIRKHWTKVAKAEQHPAQVLEYIKDFHCE
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788825, Length=146, Percent_Identity=40.4109589041096, Blast_Score=104, Evalue=3e-24,
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: =1.11.1.15 [H]
Molecular weight: Translated: 18015; Mature: 17884
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLIDNKAPDFDLEGSDGRRHRLQDYAGRRLLLFFYPRDNTSGCTKEAVGFRDLKPEFEK CCCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCCCCCHHHHH LGFVILGISRDSLASHQRFIDNHELNMVLLSDPDARVMKAYHAFGEKMMYGKQVSGVIRS CCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TVLICADGIIRKHWTKVAKAEQHPAQVLEYIKDFHCE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC >Mature Secondary Structure TLIDNKAPDFDLEGSDGRRHRLQDYAGRRLLLFFYPRDNTSGCTKEAVGFRDLKPEFEK CCCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEEECCCCCCCCHHHCCCCCCCHHHHH LGFVILGISRDSLASHQRFIDNHELNMVLLSDPDARVMKAYHAFGEKMMYGKQVSGVIRS CCEEEEECCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH TVLICADGIIRKHWTKVAKAEQHPAQVLEYIKDFHCE HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9923682 [H]