| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424115
Identifier: 189424115
GI number: 189424115
Start: 1090229
End: 1090642
Strand: Reverse
Name: 189424115
Synonym: Glov_1049
Alternate gene names: NA
Gene position: 1090642-1090229 (Counterclockwise)
Preceding gene: 189424117
Following gene: 189424110
Centisome position: 27.84
GC content: 56.04
Gene sequence:
>414_bases ATGTCGGTGCTGATAACCGCGCTCAAGCGCGAACATCAAGCCTTGAAGAATCAGGTCGCGGCCATCAAACAGGCCGGTGT GGTGTCTGCGGAGGGGTTTGCCGAGTTACAGCGTCTGCGTAACAATTTAAAGGCCCATCTCCAGCATGAAGATCGAGATC TGTATCCACGCCTTGCAGAAGCGGCTCGCGACGACGTGAATCTGCAGATTCTGCTGGATCGCTTCCAGAACGAAATGCAG GAGATCGCCACCGATGCGGAGCGCTTTTTCGAACGCTACCCAGCGCCGGAGCAGAGCGTAGTGTTTGCCCGCGATATCGG CAGGATCTTCTCTCTGCTGGGTAACCGGATTATCACTGAGGAATCAGTCCTCTATCCCCGCATGGTGGAACTGGACCGTA TCCGCTTCGGCTGA
Upstream 100 bases:
>100_bases GAAATATGCATTGCAGGCATGGCATTATCACAAAACCGTCACGAATCGATCCGGCAGGTACATAGGAACAATGCTGTAAA AGCGGGCAAAGGAGACACGT
Downstream 100 bases:
>100_bases AATCGAGATGGTGAGATAAGCAGTCAGCGCTAATATCATTTGTAATAACGAGACAATTGAAAAAGCTGCATCTTCTTGTT TACCCTTGCACCAGACATCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 136
Protein sequence:
>137_residues MSVLITALKREHQALKNQVAAIKQAGVVSAEGFAELQRLRNNLKAHLQHEDRDLYPRLAEAARDDVNLQILLDRFQNEMQ EIATDAERFFERYPAPEQSVVFARDIGRIFSLLGNRIITEESVLYPRMVELDRIRFG
Sequences:
>Translated_137_residues MSVLITALKREHQALKNQVAAIKQAGVVSAEGFAELQRLRNNLKAHLQHEDRDLYPRLAEAARDDVNLQILLDRFQNEMQ EIATDAERFFERYPAPEQSVVFARDIGRIFSLLGNRIITEESVLYPRMVELDRIRFG >Mature_136_residues SVLITALKREHQALKNQVAAIKQAGVVSAEGFAELQRLRNNLKAHLQHEDRDLYPRLAEAARDDVNLQILLDRFQNEMQE IATDAERFFERYPAPEQSVVFARDIGRIFSLLGNRIITEESVLYPRMVELDRIRFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15835; Mature: 15704
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLITALKREHQALKNQVAAIKQAGVVSAEGFAELQRLRNNLKAHLQHEDRDLYPRLAE CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AARDDVNLQILLDRFQNEMQEIATDAERFFERYPAPEQSVVFARDIGRIFSLLGNRIITE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHCCC ESVLYPRMVELDRIRFG HHHHHHHHHHHHHHCCC >Mature Secondary Structure SVLITALKREHQALKNQVAAIKQAGVVSAEGFAELQRLRNNLKAHLQHEDRDLYPRLAE HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH AARDDVNLQILLDRFQNEMQEIATDAERFFERYPAPEQSVVFARDIGRIFSLLGNRIITE HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHCCC ESVLYPRMVELDRIRFG HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA