Click here to switch to the map view.

The map label for this gene is glyQ [H]

Identifier: 189424089

GI number: 189424089

Start: 1063646

End: 1064521

Strand: Reverse

Name: glyQ [H]

Synonym: Glov_1023

Alternate gene names: 189424089

Gene position: 1064521-1063646 (Counterclockwise)

Preceding gene: 189424090

Following gene: 189424088

Centisome position: 27.17

GC content: 56.96

Gene sequence:

>876_bases
GTGACGTTTCAGAACCTGATCCTGTCGCTCCAAAATTACTGGGCAAACCAGGGCTGCGTGATTCAACAGCCCTATGACAC
TGAAAAAGGGGCCGGCACCTTCAACCCTGCCACTTTCCTGCGGGTACTGGGACCGGAGCCCTGGAATGTGGCCTATGTAG
AGCCATCCCGCCGTCCCACCGATGGCCGCTATGGTGAGAACCCCAACCGCTTGCAGCATTATTACCAGTTTCAAGTCATC
ATGAAGCCGTCACCGGCTAACATCCTGGATCTGTATCTTGATTCCCTGCGGGCCTTCGGCATCAATCCCAGTCAGCACGA
TATCCGCTTTGTCGAGGACGACTGGGAGTCCCCTACCCTTGGAGCATGGGGGCTGGGCTGGGAGGTCTGGCTGGATGGCA
TGGAGATCACCCAGTTTACCTACTTCCAGCAGGCCGGCGGGATTGACCTGAAACCGGTCTCATCGGAAATCACCTACGGC
TGCGAACGGATCGCCATGTATCTGCAGGGAGTTGACAACGTCTATGACCTGGAATGGGTCAAGGGGGTCAAATACGGCGA
CATCCACCACCAGACCGAGGTTGAATTCTCCACCTACAACTTTGAAGAGGCTGACGTGGCCCTGCTGCTGGAGCTGTTCG
GTAAATACGAAAAAGAATGTATCAGGCTGGCAGAGAAGGATCTGGTCTTCCCGGCCTATGACTTTGTCATGAAATGCTCC
CACACCTTCAACCTGCTGGATGCCCGTGGCGCGATCTCAGTGACCGAGCGTGCCTCCTACATCGGCCGGGTACGCAACGT
GGCCCGCCTCTGCGCTGAAGGCTATGTCCGGCAGCGCGAACGGCTGGGCTATCCGATGCTGAAAGGGGGGAACTAG

Upstream 100 bases:

>100_bases
TAGTTTTTCAAAGCCCTGTCAATCTTAGTTTCTTGACCGGTGCCCCCTGGCACTGGTATTTTGTACAACTTATTCCAATT
CATCCTCACGGAGGTAGACC

Downstream 100 bases:

>100_bases
ACCATGTCCAAGGAACTGTTGCTTGAAATTGGTGCCGAGGAAATCCCGGCCGGATTCGTACCCAAGGCGCTTGCATCCCT
TGAAGAGATGATCCGCAAAG

Product: glycyl-tRNA synthetase subunit alpha

Products: NA

Alternate protein names: Glycine--tRNA ligase alpha subunit; GlyRS [H]

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MTFQNLILSLQNYWANQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVI
MKPSPANILDLYLDSLRAFGINPSQHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYG
CERIAMYLQGVDNVYDLEWVKGVKYGDIHHQTEVEFSTYNFEEADVALLLELFGKYEKECIRLAEKDLVFPAYDFVMKCS
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYVRQRERLGYPMLKGGN

Sequences:

>Translated_291_residues
MTFQNLILSLQNYWANQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVI
MKPSPANILDLYLDSLRAFGINPSQHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYG
CERIAMYLQGVDNVYDLEWVKGVKYGDIHHQTEVEFSTYNFEEADVALLLELFGKYEKECIRLAEKDLVFPAYDFVMKCS
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYVRQRERLGYPMLKGGN
>Mature_290_residues
TFQNLILSLQNYWANQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPTDGRYGENPNRLQHYYQFQVIM
KPSPANILDLYLDSLRAFGINPSQHDIRFVEDDWESPTLGAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYGC
ERIAMYLQGVDNVYDLEWVKGVKYGDIHHQTEVEFSTYNFEEADVALLLELFGKYEKECIRLAEKDLVFPAYDFVMKCSH
TFNLLDARGAISVTERASYIGRVRNVARLCAEGYVRQRERLGYPMLKGGN

Specific function: Unknown

COG id: COG0752

COG function: function code J; Glycyl-tRNA synthetase, alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-II aminoacyl-tRNA synthetase family [H]

Homologues:

Organism=Escherichia coli, GI1789983, Length=291, Percent_Identity=65.6357388316151, Blast_Score=397, Evalue=1e-112,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006194
- InterPro:   IPR002310 [H]

Pfam domain/function: PF02091 tRNA-synt_2e [H]

EC number: =6.1.1.14 [H]

Molecular weight: Translated: 33436; Mature: 33305

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50861 AA_TRNA_LIGASE_II_GLYAB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFQNLILSLQNYWANQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPT
CCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHEECCCCCEEEEECCCCCCC
DGRYGENPNRLQHYYQFQVIMKPSPANILDLYLDSLRAFGINPSQHDIRFVEDDWESPTL
CCCCCCCHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYGCERIAMYLQGVDNVYDLEWV
CCCCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
KGVKYGDIHHQTEVEFSTYNFEEADVALLLELFGKYEKECIRLAEKDLVFPAYDFVMKCS
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYVRQRERLGYPMLKGGN
CHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TFQNLILSLQNYWANQGCVIQQPYDTEKGAGTFNPATFLRVLGPEPWNVAYVEPSRRPT
CHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHEECCCCCEEEEECCCCCCC
DGRYGENPNRLQHYYQFQVIMKPSPANILDLYLDSLRAFGINPSQHDIRFVEDDWESPTL
CCCCCCCHHHHHEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
GAWGLGWEVWLDGMEITQFTYFQQAGGIDLKPVSSEITYGCERIAMYLQGVDNVYDLEWV
CCCCCCHHHEECCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHH
KGVKYGDIHHQTEVEFSTYNFEEADVALLLELFGKYEKECIRLAEKDLVFPAYDFVMKCS
CCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
HTFNLLDARGAISVTERASYIGRVRNVARLCAEGYVRQRERLGYPMLKGGN
CHHHEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA