| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is 189424005
Identifier: 189424005
GI number: 189424005
Start: 973025
End: 974731
Strand: Reverse
Name: 189424005
Synonym: Glov_0939
Alternate gene names: NA
Gene position: 974731-973025 (Counterclockwise)
Preceding gene: 189424006
Following gene: 189424004
Centisome position: 24.88
GC content: 61.22
Gene sequence:
>1707_bases ATGTTTACCATTTTGAAAACGGCCTGCACAGTCCTACTGCTGCTGGCAGCCGCCACCTGCAGTTTCGCCGCAACGTCACT ACCGGACCAGGTTGTTCGTGATTTCACACCGCTCTCGGGATATGTCGTGCAATCCAGCGGAGAAGAGTATCTGATTGACC TGGGGATCGGCCAGGGTGTTGCCGTCGGTGATCTGTTCACCGTTGTCGGCCCGGGCGCCACGATTACGCACCCGGTCACC GGGAAGGTGCTGGGAACCGAGGAAACACGCAAAGGACTACTGCGGCTGATCCGTCTGAAGCAAGGCTATTCCCACAGTCG CCCGGTCGGGACTGTTGCAGGGGTCAAGCGCGGTGACGTGATCCATCGTTTTCAGGACATTCCGGCCATAGTGTGGGATT ACACCGGCCAGGGAGAACAGCTGGCCAAAGAACTGCAAACCGCGCTGCCGCATCTGAACTGGCAGGACTATGCCGCTGCC CAGCAGAAACGTCCGGCAAGCCCGGCCCGGCCCGCCACATTCAGCCCGGCACTCTACTTTATCCTGACCAGCCAGGCAGT TGAAGTACGCGCACCGGATTTCGAGTTGATCCACAGCTACCCAACCACCACATCACCCCAGCCCAGTCAGCCGGCACCGG CAGCAACAGCAGCACCGACAGCGGCGTCTGCACTTGCGGTACTGCCGCCGGTGACCGCAGGTGGCGCTGTTCTGGCCGGC GGTGAACCGATCTGGAGCTACACTGGCCTGAAGGGAACGCCGGTGGGGGTTGAGGCGGGCGATTTCGACGGCGACGGACG ACCGGAAGTGGCCATTGCCTACAGCGACCGGATTGAAATCGGACGTCTGGGCCCTGAGGGGTACCAGGGACTGGGCACTG TCCGGCTTGCCGCAGGCAGCTTGGCCTATGCCCTTGATGCTGTTGATCTCCTTCCCAACGGACGCCCTGAACTGTATGTA TCAGCCATGAACAGCAACGGCAACCCGGCCGGTATCAGCATTGAATTCCGCGACGGGCGCTACCGGACAACCATCACCAA GATTCCCTGGCATCTGCGCCGGGTTGCACTGCCCGGCGAAGGGGACGTGCTGCTGGCCCAGGAGTATGACAGCCTGGGAC GTGAGTTTGCCGGCCCGGTCTTCCGGGTCAAGCGCTCAGGAGACCGCCTGACTGCCGGTGCAAAACTGTCACTGCCCAGA CGGATCAATCTGTACGGCTTTGCCCCGTTCACCAGTCAGGGGCGCAAGCTGATCGCCTATCTGAATGATGACGGCTACCT CTCAATCGTCACCCCTGAGGGAGAAGAACTGGCCGACAGCGTGGATGCGCTGGGCGGGACCGAATCCTACTTCACCATGA ACGACGACGTGCCCAGCGGCGGAGAGAGCCGCGAGGTCTATCTCAAGGCACGGATCGAGGCATCCGATCAGGGCGACATC CTGGTCAGCGCCAACAGTGGCCTGAGCTTCCTGGCCCGCTTCAAGATGTACCTCAAGTCAGAAATCAAGCGACTGCACTG GAACGGCAAGGAACTGCGCGAGGTCTGGCATACCGCACCTGACAAGAGCTACCTGGCCGACTTCAAACTGATGCCGGGCA AGGCAGGCGAAAAGGCCAGACTGCTCAGCGTCGTGGCGTTCCCCAAAACCAGCCCTGTGGCAGACCGCAAGGCAGCCCTG CGTCTCTATCAACTGGATACCCCCTGA
Upstream 100 bases:
>100_bases TGCTTCGGCACGGCTGGCCTCCTGCTCAACAGCCACACGGGGAAGTGGCCTCTGCAGTACCTGCCCGGCAGGGACTGCAC AAACACGAAGGAGGGAACCT
Downstream 100 bases:
>100_bases ACCATAGAGACCCTGCTTCCCGCTCCTGAAGACGTTCAGGGGCGGGAAACAGACAACCCGCTGCACGCATCCCGGCACGG CAGATTGCACCGGCCACAAG
Product: FG-GAP repeat-containing protein
Products: NA
Alternate protein names: FG-GAP Repeat Protein
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MFTILKTACTVLLLLAAATCSFAATSLPDQVVRDFTPLSGYVVQSSGEEYLIDLGIGQGVAVGDLFTVVGPGATITHPVT GKVLGTEETRKGLLRLIRLKQGYSHSRPVGTVAGVKRGDVIHRFQDIPAIVWDYTGQGEQLAKELQTALPHLNWQDYAAA QQKRPASPARPATFSPALYFILTSQAVEVRAPDFELIHSYPTTTSPQPSQPAPAATAAPTAASALAVLPPVTAGGAVLAG GEPIWSYTGLKGTPVGVEAGDFDGDGRPEVAIAYSDRIEIGRLGPEGYQGLGTVRLAAGSLAYALDAVDLLPNGRPELYV SAMNSNGNPAGISIEFRDGRYRTTITKIPWHLRRVALPGEGDVLLAQEYDSLGREFAGPVFRVKRSGDRLTAGAKLSLPR RINLYGFAPFTSQGRKLIAYLNDDGYLSIVTPEGEELADSVDALGGTESYFTMNDDVPSGGESREVYLKARIEASDQGDI LVSANSGLSFLARFKMYLKSEIKRLHWNGKELREVWHTAPDKSYLADFKLMPGKAGEKARLLSVVAFPKTSPVADRKAAL RLYQLDTP
Sequences:
>Translated_568_residues MFTILKTACTVLLLLAAATCSFAATSLPDQVVRDFTPLSGYVVQSSGEEYLIDLGIGQGVAVGDLFTVVGPGATITHPVT GKVLGTEETRKGLLRLIRLKQGYSHSRPVGTVAGVKRGDVIHRFQDIPAIVWDYTGQGEQLAKELQTALPHLNWQDYAAA QQKRPASPARPATFSPALYFILTSQAVEVRAPDFELIHSYPTTTSPQPSQPAPAATAAPTAASALAVLPPVTAGGAVLAG GEPIWSYTGLKGTPVGVEAGDFDGDGRPEVAIAYSDRIEIGRLGPEGYQGLGTVRLAAGSLAYALDAVDLLPNGRPELYV SAMNSNGNPAGISIEFRDGRYRTTITKIPWHLRRVALPGEGDVLLAQEYDSLGREFAGPVFRVKRSGDRLTAGAKLSLPR RINLYGFAPFTSQGRKLIAYLNDDGYLSIVTPEGEELADSVDALGGTESYFTMNDDVPSGGESREVYLKARIEASDQGDI LVSANSGLSFLARFKMYLKSEIKRLHWNGKELREVWHTAPDKSYLADFKLMPGKAGEKARLLSVVAFPKTSPVADRKAAL RLYQLDTP >Mature_568_residues MFTILKTACTVLLLLAAATCSFAATSLPDQVVRDFTPLSGYVVQSSGEEYLIDLGIGQGVAVGDLFTVVGPGATITHPVT GKVLGTEETRKGLLRLIRLKQGYSHSRPVGTVAGVKRGDVIHRFQDIPAIVWDYTGQGEQLAKELQTALPHLNWQDYAAA QQKRPASPARPATFSPALYFILTSQAVEVRAPDFELIHSYPTTTSPQPSQPAPAATAAPTAASALAVLPPVTAGGAVLAG GEPIWSYTGLKGTPVGVEAGDFDGDGRPEVAIAYSDRIEIGRLGPEGYQGLGTVRLAAGSLAYALDAVDLLPNGRPELYV SAMNSNGNPAGISIEFRDGRYRTTITKIPWHLRRVALPGEGDVLLAQEYDSLGREFAGPVFRVKRSGDRLTAGAKLSLPR RINLYGFAPFTSQGRKLIAYLNDDGYLSIVTPEGEELADSVDALGGTESYFTMNDDVPSGGESREVYLKARIEASDQGDI LVSANSGLSFLARFKMYLKSEIKRLHWNGKELREVWHTAPDKSYLADFKLMPGKAGEKARLLSVVAFPKTSPVADRKAAL RLYQLDTP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60975; Mature: 60975
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTILKTACTVLLLLAAATCSFAATSLPDQVVRDFTPLSGYVVQSSGEEYLIDLGIGQGV CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCEEEEEECCCCCE AVGDLFTVVGPGATITHPVTGKVLGTEETRKGLLRLIRLKQGYSHSRPVGTVAGVKRGDV EHHHEEEEECCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHH IHRFQDIPAIVWDYTGQGEQLAKELQTALPHLNWQDYAAAQQKRPASPARPATFSPALYF HHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEE ILTSQAVEVRAPDFELIHSYPTTTSPQPSQPAPAATAAPTAASALAVLPPVTAGGAVLAG EEECCEEEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEC GEPIWSYTGLKGTPVGVEAGDFDGDGRPEVAIAYSDRIEIGRLGPEGYQGLGTVRLAAGS CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEECCH LAYALDAVDLLPNGRPELYVSAMNSNGNPAGISIEFRDGRYRTTITKIPWHLRRVALPGE HHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCEEEEEEECCCCEEEEEECCCC GDVLLAQEYDSLGREFAGPVFRVKRSGDRLTAGAKLSLPRRINLYGFAPFTSQGRKLIAY CCEEEEHHHHHHHHHHCCCEEEEECCCCEEECCCEECCCEEEEEEEECCCCCCCCEEEEE LNDDGYLSIVTPEGEELADSVDALGGTESYFTMNDDVPSGGESREVYLKARIEASDQGDI ECCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCE LVSANSGLSFLARFKMYLKSEIKRLHWNGKELREVWHTAPDKSYLADFKLMPGKAGEKAR EEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHCCEEECCCCCCCCEE LLSVVAFPKTSPVADRKAALRLYQLDTP EEEEEECCCCCCCCCHHHEEEEEEECCC >Mature Secondary Structure MFTILKTACTVLLLLAAATCSFAATSLPDQVVRDFTPLSGYVVQSSGEEYLIDLGIGQGV CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCEEEEEECCCCCE AVGDLFTVVGPGATITHPVTGKVLGTEETRKGLLRLIRLKQGYSHSRPVGTVAGVKRGDV EHHHEEEEECCCCEEECCCCCEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCHH IHRFQDIPAIVWDYTGQGEQLAKELQTALPHLNWQDYAAAQQKRPASPARPATFSPALYF HHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEE ILTSQAVEVRAPDFELIHSYPTTTSPQPSQPAPAATAAPTAASALAVLPPVTAGGAVLAG EEECCEEEEECCCHHHEECCCCCCCCCCCCCCCCCCCCCCHHHHHEECCCCCCCCEEEEC GEPIWSYTGLKGTPVGVEAGDFDGDGRPEVAIAYSDRIEIGRLGPEGYQGLGTVRLAAGS CCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCEEEEECCH LAYALDAVDLLPNGRPELYVSAMNSNGNPAGISIEFRDGRYRTTITKIPWHLRRVALPGE HHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEEECCEEEEEEECCCCEEEEEECCCC GDVLLAQEYDSLGREFAGPVFRVKRSGDRLTAGAKLSLPRRINLYGFAPFTSQGRKLIAY CCEEEEHHHHHHHHHHCCCEEEEECCCCEEECCCEECCCEEEEEEEECCCCCCCCEEEEE LNDDGYLSIVTPEGEELADSVDALGGTESYFTMNDDVPSGGESREVYLKARIEASDQGDI ECCCCEEEEECCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEEEEECCCCCCCE LVSANSGLSFLARFKMYLKSEIKRLHWNGKELREVWHTAPDKSYLADFKLMPGKAGEKAR EEECCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHCCEEECCCCCCCCEE LLSVVAFPKTSPVADRKAALRLYQLDTP EEEEEECCCCCCCCCHHHEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA