| Definition | Geobacter lovleyi SZ chromosome, complete genome. |
|---|---|
| Accession | NC_010814 |
| Length | 3,917,761 |
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The map label for this gene is pcaK [H]
Identifier: 189424003
GI number: 189424003
Start: 970515
End: 971861
Strand: Reverse
Name: pcaK [H]
Synonym: Glov_0937
Alternate gene names: 189424003
Gene position: 971861-970515 (Counterclockwise)
Preceding gene: 189424004
Following gene: 189424002
Centisome position: 24.81
GC content: 57.09
Gene sequence:
>1347_bases GTGAGCAGGTCTGTGAACGTTAATGAAGTATTCGATAATATTCCTTTTTCACCTTACCAAACAGCAGTTTGCCTACTCTG TTTCTGTATCGTCTTTCTTGACGGCTTTGACCTGACGGTCATCGGAGTGGCACTACCCAAGATCGCCGAGCATCTGAACG CCAAGCCGAGCGAACTGGGGTTGGCATTAAGTGCCGGACAGCTGGGGCCCATGATCGGCGCGGTACTGCTGGGCATGCTG GCTGACCGTGTCGGACGCAAGAAGACCATGTTCTGCTCAGCCATTGTCTTTGGTTTTTTCACCTACATGACCACCCATAT CACCAGTGTCGAAGAACTGGCAGCCTACCGTTTTCTGGCCGGCCTCGGCATGGGTGGCGCCATCCCCAACGCCCTGGCCT TCGGCAGTGAATATGCTCCAGCCAGAATCCGCACCTCACTTTCCCTCTATATGTGGGCCGGCATGCCCTGCGGTGCCATG ATCGCAGGATTTGCCGCTTCCTGGCTGCTGCCCCACTACGGCTGGCAATCGGTCTTCATCGTGGGGGGGATCGCGCCGGT GGCGATTGCGCTGCTGATCCTGTTGCTGTTGCCTGATTCCCTGCACCACCTGGTCAGGACCGGAACAGCCAAATCCATTG CCAAGGCCCGTGAAATTCTGGCACGGATTGACAGATCATCACCGCTCTCCGCAGATATCGAACTGACGGTCACCAGCCAG ACCAAGGAAAAAGGCGGTTCCCTCAAGTCACTGTTTACCGACCACCGCCTGCTGACGACCATACTGCTCTGGATCCTGTT CTACATGAGCTTCTATCTGCTCTGGATCCTCTTTTCCTGGGTACCCACCCTGCTCAAGAAGAGCGGTGCGTCGGTCCAGC AGTACAGCATCGGCTTTGCCTTCATTCACCTTGGCTCTGTTGTGGCTATACTCTGCATCGGCCGCTGTATGGACAAATAC AACAAGCTGAATGTCGTGAAATACGTCTTCCTGGCCGCCTTCTTTGCCATGCTGGCGTTCGGCTACTTCTCTTCAGGCTA CCCCTTTGCCGTGGTCATCGTGGTTTCCGTACTGGCCGGGCTTTTTGTGAACGGCGGCAACTCCGCACTGATGGGGCTGG CATCGGCGGTCTACCCGGCAGAGATCAGGGCCACCGGCATCGGCTGGGCCTACGGCATCGGCAAGATCGGCTCGTTCCTC GCACCGGCCGTTGGCGGATTTTATCTGGCCCGCAACTGGAGCGTGTTTGACATCTGCGCCGTCAACGGCAGCAGCGCATT GATCATTGCCGTCGTCGTCGTCATTCTGCAGCGGCATATGCGTTCAACCGCCCGTGGCGAGGTGTAA
Upstream 100 bases:
>100_bases CAAGACCGTATCGAAAGATTGCCATGCAGCTTTTCTCCAGCTGAGCCTCATCAGTGCAAAGAGGCTAATGAACCGGAATA CGATTTGAGGGAGGTCACAC
Downstream 100 bases:
>100_bases GAACCGCTTTGCCGGTTGATTCAAAAACTGAAGCCTACATCCACACAGACAAACCAACGCACAGGGGCCGGTACTCACCG GCCCCTGTTTTTTGGGCTGG
Product: major facilitator superfamily protein
Products: Proton [Cytoplasm]; 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSRSVNVNEVFDNIPFSPYQTAVCLLCFCIVFLDGFDLTVIGVALPKIAEHLNAKPSELGLALSAGQLGPMIGAVLLGML ADRVGRKKTMFCSAIVFGFFTYMTTHITSVEELAAYRFLAGLGMGGAIPNALAFGSEYAPARIRTSLSLYMWAGMPCGAM IAGFAASWLLPHYGWQSVFIVGGIAPVAIALLILLLLPDSLHHLVRTGTAKSIAKAREILARIDRSSPLSADIELTVTSQ TKEKGGSLKSLFTDHRLLTTILLWILFYMSFYLLWILFSWVPTLLKKSGASVQQYSIGFAFIHLGSVVAILCIGRCMDKY NKLNVVKYVFLAAFFAMLAFGYFSSGYPFAVVIVVSVLAGLFVNGGNSALMGLASAVYPAEIRATGIGWAYGIGKIGSFL APAVGGFYLARNWSVFDICAVNGSSALIIAVVVVILQRHMRSTARGEV
Sequences:
>Translated_448_residues MSRSVNVNEVFDNIPFSPYQTAVCLLCFCIVFLDGFDLTVIGVALPKIAEHLNAKPSELGLALSAGQLGPMIGAVLLGML ADRVGRKKTMFCSAIVFGFFTYMTTHITSVEELAAYRFLAGLGMGGAIPNALAFGSEYAPARIRTSLSLYMWAGMPCGAM IAGFAASWLLPHYGWQSVFIVGGIAPVAIALLILLLLPDSLHHLVRTGTAKSIAKAREILARIDRSSPLSADIELTVTSQ TKEKGGSLKSLFTDHRLLTTILLWILFYMSFYLLWILFSWVPTLLKKSGASVQQYSIGFAFIHLGSVVAILCIGRCMDKY NKLNVVKYVFLAAFFAMLAFGYFSSGYPFAVVIVVSVLAGLFVNGGNSALMGLASAVYPAEIRATGIGWAYGIGKIGSFL APAVGGFYLARNWSVFDICAVNGSSALIIAVVVVILQRHMRSTARGEV >Mature_447_residues SRSVNVNEVFDNIPFSPYQTAVCLLCFCIVFLDGFDLTVIGVALPKIAEHLNAKPSELGLALSAGQLGPMIGAVLLGMLA DRVGRKKTMFCSAIVFGFFTYMTTHITSVEELAAYRFLAGLGMGGAIPNALAFGSEYAPARIRTSLSLYMWAGMPCGAMI AGFAASWLLPHYGWQSVFIVGGIAPVAIALLILLLLPDSLHHLVRTGTAKSIAKAREILARIDRSSPLSADIELTVTSQT KEKGGSLKSLFTDHRLLTTILLWILFYMSFYLLWILFSWVPTLLKKSGASVQQYSIGFAFIHLGSVVAILCIGRCMDKYN KLNVVKYVFLAAFFAMLAFGYFSSGYPFAVVIVVSVLAGLFVNGGNSALMGLASAVYPAEIRATGIGWAYGIGKIGSFLA PAVGGFYLARNWSVFDICAVNGSSALIIAVVVVILQRHMRSTARGEV
Specific function: Could Be A Transporter For 3-Phenylpropionate (Hydrocinnamic Acid). [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=462, Percent_Identity=21.4285714285714, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI7662270, Length=190, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI213021148, Length=432, Percent_Identity=22.6851851851852, Blast_Score=72, Evalue=9e-13, Organism=Homo sapiens, GI73695465, Length=153, Percent_Identity=28.7581699346405, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI87081723, Length=417, Percent_Identity=29.7362110311751, Blast_Score=171, Evalue=1e-43, Organism=Escherichia coli, GI1786229, Length=402, Percent_Identity=25.8706467661692, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI87082231, Length=444, Percent_Identity=21.3963963963964, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87082159, Length=397, Percent_Identity=22.4181360201511, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87082404, Length=387, Percent_Identity=23.2558139534884, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1789207, Length=317, Percent_Identity=26.4984227129338, Blast_Score=66, Evalue=5e-12, Organism=Escherichia coli, GI1788068, Length=466, Percent_Identity=22.7467811158798, Blast_Score=65, Evalue=1e-11, Organism=Caenorhabditis elegans, GI32564663, Length=428, Percent_Identity=20.5607476635514, Blast_Score=73, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004746 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48214; Mature: 48082
Theoretical pI: Translated: 9.37; Mature: 9.37
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1 ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSVNVNEVFDNIPFSPYQTAVCLLCFCIVFLDGFDLTVIGVALPKIAEHLNAKPSELG CCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHC LALSAGQLGPMIGAVLLGMLADRVGRKKTMFCSAIVFGFFTYMTTHITSVEELAAYRFLA EEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGMGGAIPNALAFGSEYAPARIRTSLSLYMWAGMPCGAMIAGFAASWLLPHYGWQSVFI HCCCCCCCCHHHHCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCEEE VGGIAPVAIALLILLLLPDSLHHLVRTGTAKSIAKAREILARIDRSSPLSADIELTVTSQ ECCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC TKEKGGSLKSLFTDHRLLTTILLWILFYMSFYLLWILFSWVPTLLKKSGASVQQYSIGFA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FIHLGSVVAILCIGRCMDKYNKLNVVKYVFLAAFFAMLAFGYFSSGYPFAVVIVVSVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LFVNGGNSALMGLASAVYPAEIRATGIGWAYGIGKIGSFLAPAVGGFYLARNWSVFDICA HHCCCCCHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEE VNGSSALIIAVVVVILQRHMRSTARGEV ECCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SRSVNVNEVFDNIPFSPYQTAVCLLCFCIVFLDGFDLTVIGVALPKIAEHLNAKPSELG CCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHC LALSAGQLGPMIGAVLLGMLADRVGRKKTMFCSAIVFGFFTYMTTHITSVEELAAYRFLA EEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GLGMGGAIPNALAFGSEYAPARIRTSLSLYMWAGMPCGAMIAGFAASWLLPHYGWQSVFI HCCCCCCCCHHHHCCCCCCCHHHHHHHHHHEECCCCHHHHHHHHHHHHHHCCCCCCCEEE VGGIAPVAIALLILLLLPDSLHHLVRTGTAKSIAKAREILARIDRSSPLSADIELTVTSQ ECCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECC TKEKGGSLKSLFTDHRLLTTILLWILFYMSFYLLWILFSWVPTLLKKSGASVQQYSIGFA HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH FIHLGSVVAILCIGRCMDKYNKLNVVKYVFLAAFFAMLAFGYFSSGYPFAVVIVVSVLAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH LFVNGGNSALMGLASAVYPAEIRATGIGWAYGIGKIGSFLAPAVGGFYLARNWSVFDICA HHCCCCCHHHHHHHHHHCCHHHEECCCHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEEEE VNGSSALIIAVVVVILQRHMRSTARGEV ECCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; 3-(3-hydroxyphenyl)propionate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + 3-(3-hydroxyphenyl)propionate [Periplasm] = Proton [Cytoplasm] + 3-(3-hydroxyphenyl)propionate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8063101 [H]