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The map label for this gene is nrfD [C]

Identifier: 189423999

GI number: 189423999

Start: 964658

End: 965602

Strand: Reverse

Name: nrfD [C]

Synonym: Glov_0933

Alternate gene names: 189423999

Gene position: 965602-964658 (Counterclockwise)

Preceding gene: 189424000

Following gene: 189423998

Centisome position: 24.65

GC content: 59.89

Gene sequence:

>945_bases
ATGAGTACCAAACATGAAGGTTGGGGCTGGATGTTGGCCGTTGATTTCTTTTTTGCCGGCATGGGTGGCGGCATGGTGCT
GATTACCGGTTTGCTGGAACTGTTTGCCGGTTCAGGCCGTCTTTCCCTGCTGGGTAACGTGATGGGGCCGCTGTTCATGT
GCATCGGTTGCGGTTTTCTGATCCTGGAGCTGGGCAGACCGTTTCAGGCCTGGCGGGTCTTCATGAACCCCAAGGCGATC
CTGACGGCCGGTGCCTGGCTGATGTCGGTGGCAATCGTTGCCGGACTGGTCTACGCCTCGTTTGATCTTGATCCATCCTG
GTTCAAGCAGGACAAGCTGATCTGGCAGGACTGGGATCTGCTCCGCAAGCTGCTGGCCGTTGTCTGCGTCATCACCGGCT
TGGTGGTCGCCACCTATCCGGGGGTGCTGCTGGGTCGCCACAAGGGCCGCCCCTTCTGGGTCGGTCCGGGAATCATGACC
CTGTTTATGCTCTCCTCCATTGTGACCGGTGCCTCTGCCCATTTTGTCAGTGCACTGATCTATCCCCCGGGCTCGGTTCC
GGGGATCTGGCACAACCTGCCCACCTTTGTGGGTGGCCTGCTGTTCTTCCAGCTGGTCGGATGGCTCGGGTATATCTGGA
TCAAGCGTACCGGCACCACCGCTGCTGAAGCGGCCAGTGCCCTCAAGTGGATCAACGGCCAGTATGCCGACAGCTTCAAG
GCCGCATTCATCTTCGTGGGAACACTGGTACCGCTGGTGCTGGTCATGATCCCGTCCACACTCTGCCAGGGTATCGGTGC
ATTGCTGGTACTGGTGGGTGGTGTGGTGATGCGCTGCCTGGTGGTCTACGCCGGTGAAGAACGCACCTGGCTGCCGGGTG
AGCAGAAGTACCGCAAGCGGCTGCCCACCGGCAATGAGGCATTCCTGAAGGCCTGGAGCAGATAG

Upstream 100 bases:

>100_bases
TCCACAAACTTGTAAACGGGGAAAATGCCTGCCGCCTGCTGGGTGAGCTGGGGACAGACCCGTATGTCTTCTATATCTAT
GGATTGGAGGTAAAGAATCC

Downstream 100 bases:

>100_bases
TTCAATGCAGCATGGCAGCGCGCTACGCCTCCGGGCGGACATTCCATGAGTTCTTTGTACAACAACGATTCGACGGTTCC
GGCAACGGGGCCGTCGAATC

Product: polysulfide reductase NrfD

Products: oxidized cytochrome C552; NH3 [C]

Alternate protein names: Oxidoreductase Membrane Subunit

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MSTKHEGWGWMLAVDFFFAGMGGGMVLITGLLELFAGSGRLSLLGNVMGPLFMCIGCGFLILELGRPFQAWRVFMNPKAI
LTAGAWLMSVAIVAGLVYASFDLDPSWFKQDKLIWQDWDLLRKLLAVVCVITGLVVATYPGVLLGRHKGRPFWVGPGIMT
LFMLSSIVTGASAHFVSALIYPPGSVPGIWHNLPTFVGGLLFFQLVGWLGYIWIKRTGTTAAEAASALKWINGQYADSFK
AAFIFVGTLVPLVLVMIPSTLCQGIGALLVLVGGVVMRCLVVYAGEERTWLPGEQKYRKRLPTGNEAFLKAWSR

Sequences:

>Translated_314_residues
MSTKHEGWGWMLAVDFFFAGMGGGMVLITGLLELFAGSGRLSLLGNVMGPLFMCIGCGFLILELGRPFQAWRVFMNPKAI
LTAGAWLMSVAIVAGLVYASFDLDPSWFKQDKLIWQDWDLLRKLLAVVCVITGLVVATYPGVLLGRHKGRPFWVGPGIMT
LFMLSSIVTGASAHFVSALIYPPGSVPGIWHNLPTFVGGLLFFQLVGWLGYIWIKRTGTTAAEAASALKWINGQYADSFK
AAFIFVGTLVPLVLVMIPSTLCQGIGALLVLVGGVVMRCLVVYAGEERTWLPGEQKYRKRLPTGNEAFLKAWSR
>Mature_313_residues
STKHEGWGWMLAVDFFFAGMGGGMVLITGLLELFAGSGRLSLLGNVMGPLFMCIGCGFLILELGRPFQAWRVFMNPKAIL
TAGAWLMSVAIVAGLVYASFDLDPSWFKQDKLIWQDWDLLRKLLAVVCVITGLVVATYPGVLLGRHKGRPFWVGPGIMTL
FMLSSIVTGASAHFVSALIYPPGSVPGIWHNLPTFVGGLLFFQLVGWLGYIWIKRTGTTAAEAASALKWINGQYADSFKA
AFIFVGTLVPLVLVMIPSTLCQGIGALLVLVGGVVMRCLVVYAGEERTWLPGEQKYRKRLPTGNEAFLKAWSR

Specific function: Probably Involved In The Transfer Of Electrons From The Quinone Pool To The Type-C Cytochromes. [C]

COG id: COG3301

COG function: function code P; Formate-dependent nitrite reductase, membrane component

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34269; Mature: 34138

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTKHEGWGWMLAVDFFFAGMGGGMVLITGLLELFAGSGRLSLLGNVMGPLFMCIGCGFL
CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
ILELGRPFQAWRVFMNPKAILTAGAWLMSVAIVAGLVYASFDLDPSWFKQDKLIWQDWDL
HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHH
LRKLLAVVCVITGLVVATYPGVLLGRHKGRPFWVGPGIMTLFMLSSIVTGASAHFVSALI
HHHHHHHHHHHHHHHHHHCCCHHEECCCCCCEEECHHHHHHHHHHHHHHCCHHHHHHHHC
YPPGSVPGIWHNLPTFVGGLLFFQLVGWLGYIWIKRTGTTAAEAASALKWINGQYADSFK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
AAFIFVGTLVPLVLVMIPSTLCQGIGALLVLVGGVVMRCLVVYAGEERTWLPGEQKYRKR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
LPTGNEAFLKAWSR
CCCCCHHHHHHCCC
>Mature Secondary Structure 
STKHEGWGWMLAVDFFFAGMGGGMVLITGLLELFAGSGRLSLLGNVMGPLFMCIGCGFL
CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH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CCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced cytochrome C552; nitrite [C]

Specific reaction: reduced cytochrome C552 + nitrite = oxidized cytochrome C552 + NH3 [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA