Definition Geobacter lovleyi SZ chromosome, complete genome.
Accession NC_010814
Length 3,917,761

Click here to switch to the map view.

The map label for this gene is 189423950

Identifier: 189423950

GI number: 189423950

Start: 910741

End: 911670

Strand: Reverse

Name: 189423950

Synonym: Glov_0883

Alternate gene names: NA

Gene position: 911670-910741 (Counterclockwise)

Preceding gene: 189423951

Following gene: 189423949

Centisome position: 23.27

GC content: 46.56

Gene sequence:

>930_bases
ATGAATATCTATAAAGACAGACTGAAGGCAACTCGCTTTACTGCTGCAGCTATTATTATCGCAAGTTCGATGCTGGCACA
GTCAGCGCGTGCAACCGAAAATGGCGGAAGTTCCTATGGTCATGGGTCTGAAGGTTTTCTTGATGCATTCCCGCCGGGAT
TGCACCTGGTCAACTACACCAATTATTACGAAGCCGGCAGGACACTTGATAACAGCGGTAAAGAGACAGCCCCCGGCTTT
AAGACACGGGCAACAGCAAACATTTTCAGGGTTATGCATACAAGCAAGGACCTGGAAATTCTGGGCAGCAAGGTCTCATC
GCACATTCTGGTACCTATCGTAGATGTCTATGTAAATACGGCAACACCTGCAGGCAGTGACAGCAGAACAGGGCTTGGCG
ACATAACCATTGCGCCGGTTATGCTCGGTTGGCACACAAAAAACTGGCATCTGATTACCGGGGTAGACATTACCACTCCT
ACCGGCACCTATGACAAGACGCGCATAGCCAACATCGGAAGGAATTATTGGGATATTCAGCCCAACTTTATTACCGCCTA
TACCGGGGATGAAGGTTTTCAAGCGTTTGGAAAATTCATGTACGATTTTAACACCAAAAACACGGATACCGGTTATCTGT
CCGGGCAGGAGTTTCATGTTGATTATGGCTTAAGCCAGAGAGTGACGCTGTTTAATACAGATTTCCAGATAGGTGTTGGA
GGCTATATCTATCAACAAACAACCAAAGACAAGGTAGACAGTGGCTATATGGGCCCTCTATATGCCCAGGGCCGTGTCTT
TGCAGCCGGTCCCCAGATTGAGTATCAGTACAAAAACATGAGCTTCGACTTAAAGTTCCAGAAAGAATTCGAGGCACGCA
ACCGTACTGAAGGTTCCAAACTCTGGTTAAAGTTTAATTACTCATTTTGA

Upstream 100 bases:

>100_bases
GCCCTGCAACAGGGCACCAGGACTGAATAGCGGAGAAAGCATACGATTACGTAAGCTCACATTCATGGCATTTTCACAAG
CAGCCACAAAAGGATCTCTT

Downstream 100 bases:

>100_bases
TTTCCATATTCAGTGCCTGCATACGGAACATGTGTGCAGGCACTGAATGTCTATCACAAACACAGGCTAATACTAATATG
CTTAAAATAAATATTAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MNIYKDRLKATRFTAAAIIIASSMLAQSARATENGGSSYGHGSEGFLDAFPPGLHLVNYTNYYEAGRTLDNSGKETAPGF
KTRATANIFRVMHTSKDLEILGSKVSSHILVPIVDVYVNTATPAGSDSRTGLGDITIAPVMLGWHTKNWHLITGVDITTP
TGTYDKTRIANIGRNYWDIQPNFITAYTGDEGFQAFGKFMYDFNTKNTDTGYLSGQEFHVDYGLSQRVTLFNTDFQIGVG
GYIYQQTTKDKVDSGYMGPLYAQGRVFAAGPQIEYQYKNMSFDLKFQKEFEARNRTEGSKLWLKFNYSF

Sequences:

>Translated_309_residues
MNIYKDRLKATRFTAAAIIIASSMLAQSARATENGGSSYGHGSEGFLDAFPPGLHLVNYTNYYEAGRTLDNSGKETAPGF
KTRATANIFRVMHTSKDLEILGSKVSSHILVPIVDVYVNTATPAGSDSRTGLGDITIAPVMLGWHTKNWHLITGVDITTP
TGTYDKTRIANIGRNYWDIQPNFITAYTGDEGFQAFGKFMYDFNTKNTDTGYLSGQEFHVDYGLSQRVTLFNTDFQIGVG
GYIYQQTTKDKVDSGYMGPLYAQGRVFAAGPQIEYQYKNMSFDLKFQKEFEARNRTEGSKLWLKFNYSF
>Mature_309_residues
MNIYKDRLKATRFTAAAIIIASSMLAQSARATENGGSSYGHGSEGFLDAFPPGLHLVNYTNYYEAGRTLDNSGKETAPGF
KTRATANIFRVMHTSKDLEILGSKVSSHILVPIVDVYVNTATPAGSDSRTGLGDITIAPVMLGWHTKNWHLITGVDITTP
TGTYDKTRIANIGRNYWDIQPNFITAYTGDEGFQAFGKFMYDFNTKNTDTGYLSGQEFHVDYGLSQRVTLFNTDFQIGVG
GYIYQQTTKDKVDSGYMGPLYAQGRVFAAGPQIEYQYKNMSFDLKFQKEFEARNRTEGSKLWLKFNYSF

Specific function: Unknown

COG id: COG4313

COG function: function code C; Protein involved in meta-pathway of phenol degradation

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34467; Mature: 34467

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIYKDRLKATRFTAAAIIIASSMLAQSARATENGGSSYGHGSEGFLDAFPPGLHLVNYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
NYYEAGRTLDNSGKETAPGFKTRATANIFRVMHTSKDLEILGSKVSSHILVPIVDVYVNT
CHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEEEEEEC
ATPAGSDSRTGLGDITIAPVMLGWHTKNWHLITGVDITTPTGTYDKTRIANIGRNYWDIQ
CCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEECC
PNFITAYTGDEGFQAFGKFMYDFNTKNTDTGYLSGQEFHVDYGLSQRVTLFNTDFQIGVG
CCEEEEEECCHHHHHHHHHEEECCCCCCCCCEECCCEEEEECCCCCEEEEEECCEEECCC
GYIYQQTTKDKVDSGYMGPLYAQGRVFAAGPQIEYQYKNMSFDLKFQKEFEARNRTEGSK
EEEEECCCHHHCCCCCCCCEEECCEEEEECCEEEEEECCCEEEEEEHHHHHHCCCCCCCE
LWLKFNYSF
EEEEEECCC
>Mature Secondary Structure
MNIYKDRLKATRFTAAAIIIASSMLAQSARATENGGSSYGHGSEGFLDAFPPGLHLVNYT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
NYYEAGRTLDNSGKETAPGFKTRATANIFRVMHTSKDLEILGSKVSSHILVPIVDVYVNT
CHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCEEEEEEEEEEEEC
ATPAGSDSRTGLGDITIAPVMLGWHTKNWHLITGVDITTPTGTYDKTRIANIGRNYWDIQ
CCCCCCCCCCCCCCEEEEEEEEEEECCCEEEEEEEEEECCCCCCCCHHHHHCCCCEEECC
PNFITAYTGDEGFQAFGKFMYDFNTKNTDTGYLSGQEFHVDYGLSQRVTLFNTDFQIGVG
CCEEEEEECCHHHHHHHHHEEECCCCCCCCCEECCCEEEEECCCCCEEEEEECCEEECCC
GYIYQQTTKDKVDSGYMGPLYAQGRVFAAGPQIEYQYKNMSFDLKFQKEFEARNRTEGSK
EEEEECCCHHHCCCCCCCCEEECCEEEEECCEEEEEECCCEEEEEEHHHHHHCCCCCCCE
LWLKFNYSF
EEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA